| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008L19 | Sequence | 617 | 010859 (6) | ref|XP_009600613.1| | 6e-88 | PREDICTED: probable protein phosphatase 2C 10 [Nicotiana tomentosiformis] | 548 | 010859 (6) | gb|KEH31214.1| | 2e-16 | protein phosphatase 2C-like protein [Medicago truncatula] |
| JMSF002L11 | Sequence | 333 | 010859 (6) | emb|CDO97445.1| | 7e-66 | unnamed protein product [Coffea canephora] | 649 | 010859 (6) | ref|XP_007159112.1| | 5e-19 | hypothetical protein PHAVU_002G209700g [Phaseolus vulgaris] gb|ESW31106.1| hypot |
| JMSF042D17 | Sequence | 744 | 010859 (6) | ref|XP_009600613.1| | 7e-89 | PREDICTED: probable protein phosphatase 2C 10 [Nicotiana tomentosiformis] | 734 | 010859 (6) | ref|XP_007159112.1| | 4e-40 | hypothetical protein PHAVU_002G209700g [Phaseolus vulgaris] gb|ESW31106.1| hypot |
This contig is upended
. : . : . : . : . : . :
rJMFF008L19- AAATAAATATTTCAATCATACAAAAGGAAAGCTG
rJMSF002L11- ATCATACAAAAGGAAAGCTG
rJMSF042D17- ATCATACAAAAGGAAAGCTG
____________________________________________________________
consensus AAATAAATATTTCAATCATACAAAAGGAAAGCTG
. : . : . : . : . : . :
rJMFF008L19- GTCCATTTCATCAAACATTACATGAAAACCAAAGTCTGTCAATACCTAAATCTCCAATGT
rJMSF002L11- GTCCATTTCATCAAACATTACATGAAAACCAAAGTCTGTCAATACCTAAATCTCCAATGT
rJMSF042D17- GTCCATTTCATCAAACATTACATGAAAACCAAAGTCTGTCAATACCTAAATCTCCAATGT
____________________________________________________________
consensus GTCCATTTCATCAAACATTACATGAAAACCAAAGTCTGTCAATACCTAAATCTCCAATGT
. : . : . : . : . : . :
rJMFF008L19- CTGCATGCAAATTTTCGGAAAAAAAAAATAATGATAATAATAACAACTATCATATGAATC
rJMSF002L11- CTGCATGCAAATTTTCGGAAAAAAAAAATAATGATAATAATAACAACTATCATATGAATC
rJMSF042D17- CTGCATGCAAATTTTCGGAAAAAAAAAATAATGATAATAATAACAACTATCATATGAATC
____________________________________________________________
consensus CTGCATGCAAATTTTCGGAAAAAAAAAATAATGATAATAATAACAACTATCATATGAATC
. : . : . : . : . : . :
rJMFF008L19- TACAGGCTGAANAAACCAAACATCTAGCCACCACACATCCTGAGTAAAAANAATCTAACA
rJMSF002L11- TACNGGCTGAANAAACCAAGCATCTAGCCACCACACATCCTGAGTAAAAAGAATCTAACA
rJMSF042D17- TACAGGCTGAAGAAACCAAACATCTAGCCACCACACATCCTGAGTAAAAAGAATCTAACA
____________________________________________________________
consensus TACAGGCTGAAGAAACCAAACATCTAGCCACCACACATCCTGAGTAAAAAGAATCTAACA
. : . : . : . : . : . :
rJMFF008L19- TATTACANAAGGGAAGGGGAGGGACACATATAATCACTTGAAGGATACACGGAATGGTTT
rJMSF002L11- TATTACAGAAGGGAAGGGGAGGGACACATATAATCACTTGAAGGATACACGGAATGGTTT
rJMSF042D17- TATTACAGAAGGGAAGGGGAGGGACACATATAATCACTTGAAGGATACACGGAATGGTTT
____________________________________________________________
consensus TATTACAGAAGGGAAGGGGAGGGACACATATAATCACTTGAAGGATACACGGAATGGTTT
. : . : . : . : . : . :
rJMFF008L19- ATGCTGATACCGAAAAATTTTAGGGCCTGTTTTTTTTTCTGNAAATTCTGGNGTCGNCCT
rJMSF002L11- ATGCTGATACCGAANAATTTTAGGGCCNGTTTTTTTTTCNGTAAATTCNGGNGTCGNCCT
rJMSF042D17- ATGCTGATACCGAANAATTTTAGGGCCNGTTTTTTTTTCTGTAAATTCNGGNGTCGNCCT
____________________________________________________________
consensus ATGCTGATACCGAAAAATTTTAGGGCCTGTTTTTTTTTCTGTAAATTCTGGNGTCGNCCT
. : . : . : . : . : . :
rJMFF008L19- AACAAATGTCCCCTATATAAATAAATATATACTGCACACCGGGATCATCNCTTGNGTACG
rJMSF002L11- AACANATGTCCCCTATATAAATAAATATATACNGCACACCGGGATCATCGCTNGNGTACG
rJMSF042D17- AACANATGTCCCCTATATAAATAAATATATACNGCACNCCGGGATCATCGCTNGNGTACG
____________________________________________________________
consensus AACAAATGTCCCCTATATAAATAAATATATACTGCACACCGGGATCATCGCTTGNGTACG
. : . : . : . : . : . :
rJMFF008L19- GGTTTTACCCTTTAAACCGGACAACGACNCAGGANATATCGNCTTTACTTTCTCGTTCCA
rJMSF002L11- GGTTTTACCCTTTAAACCGGACAACGACNCAGGANATATCGNCTTTACTTTCNCGTTCCA
rJMSF042D17- GGTTTTACCCTTTAAACCGGACAACGACGCAGGANATATCGNCTTTACTTTCNCGTTCCA
____________________________________________________________
consensus GGTTTTACCCTTTAAACCGGACAACGACGCAGGANATATCGNCTTTACTTTCTCGTTCCA
. : . : . : . : . : . :
rJMFF008L19- ATGCTTCAGGGGCTAATTGCTTGGCTGCCTTCTGGGGGTCCTTAATCTTCTTTGCAATGT
rJMSF002L11- ANGCTTCAGNGGCTAATTGCTTGGCTGCCTTCNGGGGGTCCTTAANCTTCTTTGCAANGT
rJMSF042D17- ANGCTTCAGNGGCTAATTGCTTGGCTGCCTTCNGGGGGTCCTTAATCTTCTTTGCAANGT
____________________________________________________________
consensus ATGCTTCAGGGGCTAATTGCTTGGCTGCCTTCTGGGGGTCCTTAATCTTCTTTGCAATGT
. : . : . : . : . : . :
rJMFF008L19- CAACTGCCTCTTGGTTGGTCATGACCTTCC
rJMSF002L11- CAACTGCCTCTNGGTTGGNCATGACCTTCCNCAGGCCATCACTAGCAAGGATGAGGAGCT
rJMSF042D17- CAACNGCCTCTNGGTTGGTCATGACCTTCCACAGGCCATCACTAGCAAGGATGAGGAGCT
____________________________________________________________
consensus CAACTGCCTCTTGGTTGGTCATGACCTTCCACAGGCCATCACTAGCAAGGATGAGGAGCT
. : . : . : . : . : . :
rJMSF002L11- CGATATCTGGATTGATATCAGCACTAGTAACGTCAGGGTCANATCGCANGTGCGTCTTCA
rJMSF042D17- CGATATCTGGATTGATATCAGCACTAGTAACGTCAGGGTCAGATCGCAAGTGCGTCTTCA
____________________________________________________________
consensus CGATATCTGGATTGATATCAGCACTAGTAACGTCAGGGTCAGATCGCAAGTGCGTCTTCA
. : . : . : . : . : . :
rJMSF002L11- AGTTCTTGTCTCCAAAAGCAC
rJMSF042D17- AGTTCTTGTCTCCAAAAGCACGAGAAACAGCAAGTTGGCCATTTACTCTTGCANCATCTC
____________________________________________________________
consensus AGTTCTTGTCTCCAAAAGCACGAGAAACAGCAAGTTGGCCATTTACTCTTGCANCATCTC
. : . : . : . : . : . :
rJMSF042D17- CTGGCATGTTTGAAACAAAGCCACCTCTATCTTCTATGCTGCCTC
JMSF002L11+ CTGGCATGTTTGAAACAAAGCCACCTCTATCTTCTATGCTGCCTCGCTCAGTATTGGGCT
JMFF008L19+ CTCAGTATTGGGCT
JMSF042D17+ TGCTGCCTCGCTCAGTATTGGGCT
____________________________________________________________
consensus CTGGCATGTTTGAAACAAAGCCACCTCTATCTTCTATGCTGCCTCGCTCAGTATTGGGCT
. : . : . : . : . : . :
JMSF002L11+ CATGATCAATCGACAATTGTATAGCCTCCCCCCGTCTAGAAAGGACTGCTCGTGAATCCC
JMFF008L19+ CATGATCAATCGACAATTGTATAGCCTCCCCCCGTCTAGAAAGGACTGCTCGTGAATCCC
JMSF042D17+ CATGATCAATCGACAATTGTATAGCCTCCCCCCGTCTAGAAAGGACTGCTCGTGAATCCC
____________________________________________________________
consensus CATGATCAATCGACAATTGTATAGCCTCCCCCCGTCTAGAAAGGACTGCTCGTGAATCCC
. : . : . : . : . : . :
JMSF002L11+ CAACATTAGCTACCCACAATTTCTGGCCATTTATGAGAATTGCAGTGACTGCAGTGGACC
JMFF008L19+ CAACATTAGCTACCCACAATTTCTGGCCATTTATGAGAATTGCAGTGACTGCAGTGGACC
JMSF042D17+ CAACATTAGCTACCCACAATTTCTGGCCATTTATGAGAATTGCAGTGACTGCAGTGGACC
____________________________________________________________
consensus CAACATTAGCTACCCACAATTTCTGGCCATTTATGAGAATTGCAGTGACTGCAGTGGACC
. : . : . : . : . : . :
JMSF002L11+ CACCTCTCCCTAGATCGGGGCTGTGCGAGAGAATAGCCTGATCAGTTCTCTCGTATGCTT
JMFF008L19+ CACCTCTCCCTAGATCGGGGCTGTGCGAGAGAATAGCCTGATCAGTTCTCTCGTATGCTT
JMSF042D17+ CACCTCTCCCTAGATCGGGGCTGTGCGAGAGAATAGCCTGATCAGTTCTCTCGTATGCTT
____________________________________________________________
consensus CACCTCTCCCTAGATCGGGGCTGTGCGAGAGAATAGCCTGATCAGTTCTCTCGTATGCTT
. : . : . : . : . : . :
JMSF002L11+ TAAAGATCGCTGTCTGTGGATCAGTCCAGAAGTCATCCTCCTTCAAGATATTGGAAAACA
JMFF008L19+ TAAAGATCGCTGTCTGTGGATCAGTCCAGAAGTCATCCTCCTTCAAGATATTGGAAAACA
JMSF042D17+ TAAAGATCGCTGTCTGTGGATCAGTCCAGAAGTCATCCTCCTTCAAGATATTGGAAAACA
____________________________________________________________
consensus TAAAGATCGCTGTCTGTGGATCAGTCCAGAAGTCATCCTCCTTCAAGATATTGGAAAACA
. : . : . : . : . : . :
JMSF002L11+ AATGCTTTTGCAAATATGCAGGTACACTGTCTC
JMFF008L19+ AATGCTTTTGCAAATATGCAGGTACACTGTCTCCCAAATGCCCGTCATAAATAGCAAACA
JMSF042D17+ AATGCTTTTGCAAATATGCAGGTACACTGTCTCCCAAATGCCCGTCATAAATAGCAAACA
____________________________________________________________
consensus AATGCTTTTGCAAATATGCAGGTACACTGTCTCCCAAATGCCCGTCATAAATAGCAAACA
. : . : . : . : . : . :
JMFF008L19+ GCCCTAGCTCACGTCCGTGCATCTGAACAAACTTCGCAACATGGAAATCCTCCATGGGAT
JMSF042D17+ GCCCTAGCTCACGTCCGTGCATCTGAACAAACTTCGCAACATGGAAATCCTCCATGGGAT
____________________________________________________________
consensus GCCCTAGCTCACGTCCGTGCATCTGAACAAACTTCGCAACATGGAAATCCTCCATGGGAT
. : . : . : . : . : . :
JMFF008L19+ GGCTTGCTTTCCCTTTAACAAGGTTGAAACCAAACTTGGCAGGCCCGTGGTGGCTTCTTC
JMSF042D17+ GGCTTGCTTTCCCTTTAACAAGGTTGAAACCAAACTTGGCAGGCCCGTGGTGGCTTCTTC
____________________________________________________________
consensus GGCTTGCTTTCCCTTTAACAAGGTTGAAACCAAACTTGGCAGGCCCGTGGTGGCTTCTTC
. : . : . : . : . : . :
JMFF008L19+ CCTTGCCAGAGCCACATGACGACCGTCCTCCTGCAAGCGAATCGAAACAGCATAGACAAT
JMSF042D17+ CCTTGCCAGAGCCACATGACGACCGTCCTCCTGCAAGCGAATCGAAACAGCATAGACAAT
____________________________________________________________
consensus CCTTGCCAGAGCCACATGACGACCGTCCTCCTGCAAGCGAATCGAAACAGCATAGACAAT
. : . : . : . : . : . :
JMFF008L19+ CCATATAATTCAGCTCAAACTCAGCTTCTTTCTCCACCAATCAACATCTACTCTTAAAAA
JMSF042D17+ CCATATAATTCAGCTCAAACTCAGCTTCTTTCTCCACCAATCAACATCTACTCTTAAAAA
____________________________________________________________
consensus CCATATAATTCAGCTCAAACTCAGCTTCTTTCTCCACCAATCAACATCTACTCTTAAAAA
. : . : . : . : . : . :
JMFF008L19+ CTTCAAAGCCCTGAAATTCAAAACCTCGATCCAAAGGGTATCGATACTTTTTGAAGAAAC
JMSF042D17+ CTTCAAAGCCCTGAAATTCAAAACCTCGATCCAAAGGGTATCGATACTTTTTGAAGAAAC
____________________________________________________________
consensus CTTCAAAGCCCTGAAATTCAAAACCTCGATCCAAAGGGTATCGATACTTTTTGAAGAAAC
. : . : . : . : . : . :
JMFF008L19+ GAC
JMSF042D17+ GACAAGCGAAAAAATTGGTACACCTACTGGATTTTGACTCAGCCGCTGACCCAGATTTTT
____________________________________________________________
consensus GACAAGCGAAAAAATTGGTACACCTACTGGATTTTGACTCAGCCGCTGACCCAGATTTTT
. : . : . : . : . : . :
JMSF042D17+ ATACGCGCTGCAGCTATATATGTAACTCGAGATATAAAAGCAGATAGAGAAAGAAAATTC
____________________________________________________________
consensus ATACGCGCTGCAGCTATATATGTAACTCGAGATATAAAAGCAGATAGAGAAAGAAAATTC