List of clones in pair P008777.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001F18Sequence547010309 (36)ref|XP_009382381.1|2e-12PREDICTED: remorin-like [Musa acuminata subsp. malaccensis]671010309 (36)ref|XP_009778199.1|4e-35PREDICTED: remorin-like isoform X1 [Nicotiana sylvestris]
JMFF011F24Sequence694010309 (36)ref|XP_009778199.1|2e-26PREDICTED: remorin-like isoform X1 [Nicotiana sylvestris]
JMFF020P05Sequence542010309 (36)ref|XP_009382381.1|7e-08PREDICTED: remorin-like [Musa acuminata subsp. malaccensis]715010309 (36)ref|XP_009778199.1|7e-38PREDICTED: remorin-like isoform X1 [Nicotiana sylvestris]
JMFF023F15Sequence351010309 (36)788010309 (36)ref|XP_009778199.1|1e-37PREDICTED: remorin-like isoform X1 [Nicotiana sylvestris]
JMFF034E08Sequence573010309 (36)ref|XP_009778199.1|1e-39PREDICTED: remorin-like isoform X1 [Nicotiana sylvestris]663010309 (36)ref|XP_009778199.1|2e-35PREDICTED: remorin-like isoform X1 [Nicotiana sylvestris]
JMFF035B17Sequence539010309 (36)ref|XP_009382381.1|6e-08PREDICTED: remorin-like [Musa acuminata subsp. malaccensis]728010309 (36)ref|XP_009778199.1|8e-38PREDICTED: remorin-like isoform X1 [Nicotiana sylvestris]
JMFF036C10Sequence465010309 (36)681010309 (36)ref|XP_009778200.1|5e-34PREDICTED: remorin-like isoform X2 [Nicotiana sylvestris]
JMFF036H19Sequence542010309 (36)ref|XP_009382381.1|7e-08PREDICTED: remorin-like [Musa acuminata subsp. malaccensis]692010309 (36)ref|XP_009778199.1|7e-38PREDICTED: remorin-like isoform X1 [Nicotiana sylvestris]
JMFF037F13Sequence514010309 (36)ref|XP_009769682.1|5e-18PREDICTED: inactive rhomboid protein 1-like [Nicotiana sylvestris]761004699 (3)ref|XP_011081018.1|5e-75PREDICTED: inactive rhomboid protein 1-like [Sesamum indicum]
JMFF041A10Sequence635010309 (36)ref|XP_009778200.1|7e-15PREDICTED: remorin-like isoform X2 [Nicotiana sylvestris]597010309 (36)ref|XP_009778200.1|6e-32PREDICTED: remorin-like isoform X2 [Nicotiana sylvestris]
JMFF041K23Sequence647010309 (36)ref|XP_009778199.1|9e-17PREDICTED: remorin-like isoform X1 [Nicotiana sylvestris]566010309 (36)ref|XP_009778200.1|5e-32PREDICTED: remorin-like isoform X2 [Nicotiana sylvestris]
JMFF042D10Sequence616010309 (36)ref|XP_009778200.1|5e-24PREDICTED: remorin-like isoform X2 [Nicotiana sylvestris]442010309 (36)gb|KJB23872.1|2e-23hypothetical protein B456_004G118800 [Gossypium raimondii]
JMFF042M18Sequence641010309 (36)ref|XP_009778200.1|2e-14PREDICTED: remorin-like isoform X2 [Nicotiana sylvestris]630010309 (36)ref|XP_009778199.1|6e-37PREDICTED: remorin-like isoform X1 [Nicotiana sylvestris]
JMFF044I07Sequence648010309 (36)ref|XP_009778200.1|4e-16PREDICTED: remorin-like isoform X2 [Nicotiana sylvestris]
JMFF045M21Sequence622010309 (36)ref|XP_003580217.1|1e-07PREDICTED: remorin-like [Brachypodium distachyon]602010309 (36)ref|XP_009778200.1|2e-38PREDICTED: remorin-like isoform X2 [Nicotiana sylvestris]
JMFF046G08Sequence553010309 (36)ref|XP_003580217.1|3e-04PREDICTED: remorin-like [Brachypodium distachyon]605010309 (36)ref|XP_009778199.1|7e-30PREDICTED: remorin-like isoform X1 [Nicotiana sylvestris]
JMFN004I15Sequence573010309 (36)ref|XP_009382381.1|5e-06PREDICTED: remorin-like [Musa acuminata subsp. malaccensis]
JMFN005I21Sequence580010309 (36)gb|KFK35323.1|9e-13hypothetical protein AALP_AA5G269500 [Arabis alpina]
JMFN007F15Sequence525004699 (3)ref|XP_009769682.1|2e-89PREDICTED: inactive rhomboid protein 1-like [Nicotiana sylvestris]
JMFN019H16Sequence522004699 (3)ref|XP_011081018.1|1e-62PREDICTED: inactive rhomboid protein 1-like [Sesamum indicum]
JMFN028I04Sequence639010309 (36)ref|XP_009778199.1|4e-17PREDICTED: remorin-like isoform X1 [Nicotiana sylvestris]
JMFN038F23Sequence622010309 (36)gb|EYZ92514.1|3e-08hypothetical protein BW79_18675 [Escherichia coli O119:H4 str. 03-3458]
JMSF022E01Sequence625010309 (36)ref|XP_009382381.1|6e-13PREDICTED: remorin-like [Musa acuminata subsp. malaccensis]757010309 (36)ref|XP_009778199.1|8e-38PREDICTED: remorin-like isoform X1 [Nicotiana sylvestris]
JMSF044P21Sequence280010309 (36)ref|XP_010061093.1|1e-05PREDICTED: remorin-like isoform X3 [Eucalyptus grandis] gb|KCW90708.1| hypotheti

Contig 10309 BLAST Hits against nr-aa DB Show

Contig 4699 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig010309============================================1244         ============================================Contig004699============================================1098
  77       --------------------------->JMFF037F13                                                                                                    <--------------------------------------------------------------------rJMFF037F13  
                                                 <------rJMSF044P21-                                                  
                                                          ---------------------------------------------->JMFN005I21-  
             --------------------------------------------->JMFN004I15-                                                
                               <------------------------------------------------------rJMFF011F24-                    
             -------------------------------------------------->JMFN028I04-                                           
            --------------------------------------------------->JMFF044I07-                                           
             ----------------------------------------->JMFN038F23-                                                    
                                                                                                                                                                       ----------------------------------------------->JMFN019H16-  
                                                                                                                      ---------------------------------------------->JMFN007F15-  
            ------------------------------------------------->JMSF022E01**
            ------------------------------------------>JMFF035B17**
            --------------------------------------------------->JMFF041K23**
                                                 <----------------------------------rJMFF042D10**
                         <---------------------------------------------------------rJMFF020P05**
                 ------------------------------------------->JMFF001F18**
            ------------------------------------------->JMFF036H19**
                   ------------------------------------------------->JMFF042D10**
            -------------------------------------------------->JMFF042M18**
                         <------------------------------------------------------------rJMSF022E01**
            ------------------------------------------->JMFF020P05**
                         <--------------------------------------------------------------rJMFF023F15**
                                        <-----------------------------------------------rJMFF045M21**
            -------------------------------------------->JMFF046G08**
         --------------------------->JMFF023F15**
       ------------------------------------->JMFF036C10**
                                           <---------------------------------------------rJMFF041K23**
                                           <-----------------------------------------------rJMFF046G08**
                                <-----------------------------------------------------rJMFF001F18**
                                           <--------------------------------------------rJMFF042M18**
                                  <----------------------------------------------------rJMFF034E08**
                                <-----------------------------------------------------rJMFF036C10**
                                  --------------------------------------------->JMFF034E08**
                            <---------------------------------------------------------rJMFF035B17**
                                <------------------------------------------------------rJMFF036H19**
     ------------------------------------------------>JMFF045M21**
            -------------------------------------------------->JMFF041A10**
                                           <--------------------------------------------rJMFF041A10**