Contig 004699:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037F13Sequence514010309 (36)ref|XP_009769682.1|5e-18PREDICTED: inactive rhomboid protein 1-like [Nicotiana sylvestris]761004699 (3)ref|XP_011081018.1|5e-75PREDICTED: inactive rhomboid protein 1-like [Sesamum indicum]
JMFN007F15Sequence525004699 (3)ref|XP_009769682.1|2e-89PREDICTED: inactive rhomboid protein 1-like [Nicotiana sylvestris]
JMFN019H16Sequence522004699 (3)ref|XP_011081018.1|1e-62PREDICTED: inactive rhomboid protein 1-like [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF037F13- TATATATATATAGTTTAA
                      ____________________________________________________________
consensus TATATATATATAGTTTAA
 
. : . : . : . : . : . :
JMFN019H16+ AAAAAAGGATAGAAGATCAAAGGTTGGTATGAAAAGAATCTGA
rJMFF037F13- TCTATGATACAAAACGAAAAAAAGAATAGAAGATCAAAGGTTGGTATGAAAAGAATCTGA
                      ____________________________________________________________
consensus TCTATGATACAAAACGAAAAAAAGGATAGAAGATCAAAGGTTGGTATGAAAAGAATCTGA
 
. : . : . : . : . : . :
JMFN019H16+ TTTTGTGTTCAATATCAGTTATTATCGCGCTGCCATCTGGACGTGGGCACGCAGCTTAAA
rJMFF037F13- TTTTGTGTTCAATATCAGTTATTATCGCACTGCCATCTCGACGTGGGCACACAGCTTAAA
                      ____________________________________________________________
consensus TTTTGTGTTCAATATCAGTTATTATCGCGCTGCCATCTGGACGTGGGCACGCAGCTTAAA
 
. : . : . : . : . : . :
JMFN019H16+ TAGTGGCACCAACTGCAGCGATCATGTGCGTTCTCTCCTCTAAAGAGCATCGTCAACCCC
rJMFF037F13- TAGTGGCACCAACTGCAACGATCATTTGCGTTCTCTCCTCTAAAGAGCATCGTCAACCCC
                      ____________________________________________________________
consensus TAGTGGCACCAACTGCAGCGATCATTTGCGTTCTCTCCTCTAAAGAGCATCGTCAACCCC
 
. : . : . : . : . : . :
JMFN019H16+ ACCGCAAATCCAACGATCAATAAAATCAAGGCAGCCACCAAGAAAACGTATTGGAATATA
rJMFF037F13- ACCGCAAATCCAACGATCAATAAAATCAAGGCAACCACCAAGAAAACGTATTGGAATATA
                      ____________________________________________________________
consensus ACCGCAAATCCAACGATCAATAAAATCAAGGCAGCCACCAAGAAAACGTATTGGAATATA
 
. : . : . : . : . : . :
JMFN019H16+ GTGTGCTTGGACTTGTGTCGGCCTTCAGCCGGAAGATTTTGCCTTTCAAGCCAACCAAAC
rJMFF037F13- GTGTGCTTGGACTTGTGTCGGCCTTCAGCCGGAAGATTTTGCCTTTCAAGCCAACCAAAC
                      ____________________________________________________________
consensus GTGTGCTTGGACTTGTGTCGGCCTTCAGCCGGAAGATTTTGCCTTTCAAGCCAACCAAAC
 
. : . : . : . : . : . :
JMFN019H16+ TGGGGACGCAGTAGCAGCACAAAGCCGAGAAGAAACCCGCTAATGAAACCTCCAATATGG
rJMFF037F13- TGGGGACGCAGTAGCAGCACAAAGCCGAGAAGAAACCCGCTAATGAAACCTCCAATATGG
                      ____________________________________________________________
consensus TGGGGACGCAGTAGCAGCACAAAGCCGAGAAGAAACCCGCTAATGAAACCTCCAATATGG
 
. : . : . : . : . : . :
JMFN019H16+ GCAAAATTGTCAACGTGAGGAAGAATTCCAACAGCCAAGTTGATTGCAATGATAACGACG
rJMFF037F13- GCAAAATTGTCAACGTGAGGAAGAATTCCAACAGCCAAGTTGATTGCAATGATAACGACG
                      ____________________________________________________________
consensus GCAAAATTGTCAACGTGAGGAAGAATTCCAACAGCCAAGTTGATTGCAATGATAACGACG
 
. : . : . : . : . : . :
JMFN019H16+ AGAGTAAAAAGAGCGGCAGCCTTATTGGCATAAATTGTCCAGTTAGTAATCAGCTCCGAC
rJMFF037F13- AGAGTAAAAAGAGCGGCAGCCTTATTGGCATAAATTGTCCAGTTAGTAATCAGCTCCGAC
                      ____________________________________________________________
consensus AGAGTAAAAAGAGCGGCAGCCTTATTGGCATAAATTGTCCAGTTAGTAATCAGCTCCGAC
 
. : . : . : . : . : . :
JMFN019H16+ AGCATTGCTCCAAGAAGCCCAAAGACTGCACCAGAAGCTCCGACAGAAATGCTGTGTTG
rJMFF037F13- AGCATTGCTCCAAGAAGCCCAAAGACTGCACCAGAAGCTCCGACAGAAATGCTGTGTTGA
                      ____________________________________________________________
consensus AGCATTGCTCCAAGAAGCCCAAAGACTGCACCAGAAGCTCCGACAGAAATGCTGTGTTGA
 
. : . : . : . : . : . :
rJMFF037F13- ATGAATAGGGAAGACATAACACTCCCGCCTATTCCTGACAGCAGGTAGATTAGACCTACC
JMFN007F15+ TCCCGCCTATTCCTGACAGCAGGTAGATTAGACCTACC
                      ____________________________________________________________
consensus ATGAATAGGGAAGACATAACACTCCCGCCTATTCCTGACAGCAGGTAGATTAGACCTACC
 
. : . : . : . : . : . :
rJMFF037F13- CGCACAAATCCAAATTTGCTGCTCAAGGCGAATTCCAATAAAAATCAAGCTCAACATGTT
JMFN007F15+ CGCACAAATCCAAA-TTGCTGCTCAAGGCGAATTCCAATAAAAATCAAGCTCAACATGTT
                      ____________________________________________________________
consensus CGCACAAATCCAAATTTGCTGCTCAAGGCGAATTCCAATAAAAATCAAGCTCAACATGTT
 
. : . : . : . : . : . :
rJMFF037F13- AGCAAGCAAATGGACAACCCCGGCATGCAACCATATGCAAGTGAAAAGCCTCCATCCTTG
JMFN007F15+ AGCAAGCAAATGGACAACCCCGGCATGCAACCATATGCAAGTGAAAAGCCTCCATCCTTG
                      ____________________________________________________________
consensus AGCAAGCAAATGGACAACCCCGGCATGCAACCATATGCAAGTGAAAAGCCTCCATCCTTG
 
. : . : . : . : . : . :
rJMFF037F13- ATGATCATTCACTATCTTGTTCC
JMFN007F15+ ATGATCATTCACTATCTTGTTCCATTCCAGTGCACCCAATTTTTCCAGTGTAGAAGAAGA
                      ____________________________________________________________
consensus ATGATCATTCACTATCTTGTTCCATTCCAGTGCACCCAATTTTTCCAGTGTAGAAGAAGA
 
. : . : . : . : . : . :
JMFN007F15+ GGGCCCAAAAAGGGGATTTTCTCTTAGGGGTTGAAAAGAGAGCCTCCCGAGGAACCTTGC
                      ____________________________________________________________
consensus GGGCCCAAAAAGGGGATTTTCTCTTAGGGGTTGAAAAGAGAGCCTCCCGAGGAACCTTGC
 
. : . : . : . : . : . :
JMFN007F15+ AACACACTCCCCATTCCTCCCAAACCTTCTCCTCTCATCATTGTTAGGGCAATTATTCAC
                      ____________________________________________________________
consensus AACACACTCCCCATTCCTCCCAAACCTTCTCCTCTCATCATTGTTAGGGCAATTATTCAC
 
. : . : . : . : . : . :
JMFN007F15+ AAACATGATGACGATAAACATAGCAACGTTAGCCACCACAATCATGGGCACCAGCCAGGA
                      ____________________________________________________________
consensus AAACATGATGACGATAAACATAGCAACGTTAGCCACCACAATCATGGGCACCAGCCAGGA
 
. : . : . : . : . : . :
JMFN007F15+ TGTCCACTGTTTCTCCGAGGTTTCCACATAGTACACTGATGATGATGGCGGTACTGCTGC
                      ____________________________________________________________
consensus TGTCCACTGTTTCTCCGAGGTTTCCACATAGTACACTGATGATGATGGCGGTACTGCTGC
 
. : . : . : . : . : . :
JMFN007F15+ ATAGTTTCTTGGTGGGTATGCGCTATTTCTGCCCTTTGTTCCTCCCCCTCTCTCCAGATC
                      ____________________________________________________________
consensus ATAGTTTCTTGGTGGGTATGCGCTATTTCTGCCCTTTGTTCCTCCCCCTCTCTCCAGATC