clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF020A21 | Sequence | 174 | 007357 (18) | ref|XP_010695078.1| | 3e-08 | PREDICTED: 40S ribosomal protein S17 [Beta vulgaris subsp. vulgaris] | 521 | 007357 (18) | ref|XP_009768563.1| | 1e-38 | PREDICTED: 40S ribosomal protein S17-like [Nicotiana sylvestris] |
JMFF022I17 | Sequence | 451 | 007357 (18) | ref|XP_009768563.1| | 4e-76 | PREDICTED: 40S ribosomal protein S17-like [Nicotiana sylvestris] | 682 | 007357 (18) | ref|XP_009768563.1| | 1e-78 | PREDICTED: 40S ribosomal protein S17-like [Nicotiana sylvestris] |
JMFF025G24 | Sequence | 249 | 007357 (18) | 217 | 007357 (18) | ||||||
JMFF044C24 | Sequence | 647 | 007357 (18) | ref|XP_009768563.1| | 8e-79 | PREDICTED: 40S ribosomal protein S17-like [Nicotiana sylvestris] | 582 | 007357 (18) | ref|XP_009768563.1| | 1e-62 | PREDICTED: 40S ribosomal protein S17-like [Nicotiana sylvestris] |
JMFF048J16 | Sequence | 435 | 007357 (18) | ref|XP_009768563.1| | 8e-75 | PREDICTED: 40S ribosomal protein S17-like [Nicotiana sylvestris] | 371 | 007357 (18) | ref|XP_009768563.1| | 9e-12 | PREDICTED: 40S ribosomal protein S17-like [Nicotiana sylvestris] |
JMFN006O07 | Sequence | 642 | 007357 (18) | ref|XP_009768563.1| | 9e-79 | PREDICTED: 40S ribosomal protein S17-like [Nicotiana sylvestris] | |||||
JMFN009F03 | Sequence | 594 | 007357 (18) | ref|XP_009768563.1| | 5e-79 | PREDICTED: 40S ribosomal protein S17-like [Nicotiana sylvestris] | |||||
JMFN029D05 | Sequence | 619 | 007357 (18) | ref|XP_009768563.1| | 7e-72 | PREDICTED: 40S ribosomal protein S17-like [Nicotiana sylvestris] | |||||
JMSF002M18 | Sequence | 312 | 007357 (18) | ref|XP_004249419.1| | 5e-07 | PREDICTED: 40S ribosomal protein S17-like [Solanum lycopersicum] ref|XP_00633915 | 275 | 007357 (18) | ref|XP_004249419.1| | 4e-07 | PREDICTED: 40S ribosomal protein S17-like [Solanum lycopersicum] ref|XP_00633915 |
JMSF003M18 | Sequence | 342 | 003688 (2) | ref|XP_009767923.1| | 7e-45 | PREDICTED: putative G3BP-like protein isoform X1 [Nicotiana sylvestris] | 249 | 007357 (18) | ref|XP_004249419.1| | 1e-05 | PREDICTED: 40S ribosomal protein S17-like [Solanum lycopersicum] ref|XP_00633915 |
JMSF020B08 | Sequence | 680 | 007357 (18) | ref|XP_009768563.1| | 1e-78 | PREDICTED: 40S ribosomal protein S17-like [Nicotiana sylvestris] | 637 | 007357 (18) | ref|XP_009768563.1| | 9e-79 | PREDICTED: 40S ribosomal protein S17-like [Nicotiana sylvestris] |
JMSF024N21 | Sequence | 686 | 003688 (2) | emb|CDO99318.1| | 8e-87 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003688============================================ 686
The following clones don't have the opposite end in this pair.
--------------------------------------------------------------------------------------------------->JMSF024N21- ----------------------------------------------->JMSF003M18*