clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001D03 | Sequence | 593 | 003019 (9) | gb|ADV57637.1| | 6e-40 | copper binding protein 2 [Gossypium hirsutum] | 747 | 003019 (9) | gb|ADV57637.1| | 2e-39 | copper binding protein 2 [Gossypium hirsutum] |
JMFF002G20 | Sequence | 656 | 003019 (9) | gb|ADV57637.1| | 6e-40 | copper binding protein 2 [Gossypium hirsutum] | |||||
JMFF019J05 | Sequence | 597 | 003019 (9) | gb|ADV57637.1| | 6e-40 | copper binding protein 2 [Gossypium hirsutum] | 119 | 016957 | |||
JMFF050P14 | Sequence | 532 | 003019 (9) | ref|XP_009617386.1| | 2e-38 | PREDICTED: mavicyanin-like isoform X1 [Nicotiana tomentosiformis] | 365 | 003019 (9) | |||
JMFN028L20 | Sequence | 586 | 003019 (9) | gb|KHG23308.1| | 2e-39 | hypothetical protein F383_28880 [Gossypium arboreum] | |||||
JMSF052G15 | Sequence | 723 | 003019 (9) | gb|ADV57637.1| | 2e-39 | copper binding protein 2 [Gossypium hirsutum] | 753 | 003019 (9) | gb|ADV57637.1| | 2e-39 | copper binding protein 2 [Gossypium hirsutum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003019============================================ 773 6 ---------------------------------------------------------------------------->JMFF001D03 <------------------------------------------------------------------------------------------------rJMFF001D03 7 ----------------------------------------------------------------->JMFF050P14 <-------------------------------------rJMFF050P14 29 ------------------------------------------------------------------------------------------->JMSF052G15 <------------------------------------------------------------------------------------------------rJMSF052G15
The following clones don't have the opposite end in this pair.
<------------------------------------------------------------------------------------rJMFF002G20- --------------------------------------------------------------------------->JMFN028L20- ---------------------------------------------------------------------------->JMFF019J05#