List of clones in pair P008061.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011C24Sequence551005036 (14)ref|XP_007047094.1|8e-74Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709705005036 (14)ref|XP_007047094.1|3e-97Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709
JMFF028G18Sequence419005036 (14)ref|XP_007047094.1|5e-47Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709107018030
JMFF032H15Sequence528005036 (14)ref|XP_007047094.1|3e-68Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709665005036 (14)ref|XP_007047094.1|1e-93Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709
JMFF037B23Sequence541005036 (14)ref|XP_007047094.1|5e-75Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709675005036 (14)ref|XP_007047094.1|2e-97Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709
JMFF037J23Sequence552005036 (14)ref|XP_007047094.1|5e-72Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709702005036 (14)ref|XP_007047094.1|3e-97Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709
JMSF016M16Sequence424005036 (14)ref|XP_007047094.1|5e-37Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709798005036 (14)ref|XP_007047094.1|6e-99Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709
JMSF017M16Sequence243005036 (14)ref|XP_011099251.1|2e-42PREDICTED: cold-regulated 413 plasma membrane protein 2 [Sesamum indicum]
JMSF040E23Sequence682005036 (14)ref|XP_007047094.1|1e-103Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709851005036 (14)ref|XP_007047094.1|9e-103Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709

Contig 5036 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig005036============================================ 908         
  14   ----------------------------------------------------------->JMFF011C24                                         
                           <-----------------------------------------------------------------------------rJMFF011C24  
  14   ----------------------------------------------------------->JMFF037J23                                         
                            <----------------------------------------------------------------------------rJMFF037J23  
  38 --------------------------------------------->JMSF016M16                                                         
               <-------------------------------------------------------------------------------------rJMSF016M16  
  43   --------------------------------------------------------->JMFF032H15                                           
                             <------------------------------------------------------------------------rJMFF032H15  
  51   ----------------------------------------------------------->JMFF037B23                                         
                           <-------------------------------------------------------------------------rJMFF037B23  
  59   -------------------------------------------------------------------------->JMSF040E23                          
       <---------------------------------------------------------------------------------------------rJMSF040E23

The following clones don't have the opposite end in this pair.

       --------------------------------------------->JMFF028G18#                                                      
                                 -------------------------->JMSF017M16-