Contig 005036:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011C24Sequence551005036 (14)ref|XP_007047094.1|8e-74Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709705005036 (14)ref|XP_007047094.1|3e-97Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709
JMFF028G18Sequence419005036 (14)ref|XP_007047094.1|5e-47Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709107018030
JMFF032H15Sequence528005036 (14)ref|XP_007047094.1|3e-68Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709665005036 (14)ref|XP_007047094.1|1e-93Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709
JMFF037B23Sequence541005036 (14)ref|XP_007047094.1|5e-75Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709675005036 (14)ref|XP_007047094.1|2e-97Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709
JMFF037J23Sequence552005036 (14)ref|XP_007047094.1|5e-72Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709702005036 (14)ref|XP_007047094.1|3e-97Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709
JMSF016M16Sequence424005036 (14)ref|XP_007047094.1|5e-37Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709798005036 (14)ref|XP_007047094.1|6e-99Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709
JMSF017M16Sequence243005036 (14)ref|XP_011099251.1|2e-42PREDICTED: cold-regulated 413 plasma membrane protein 2 [Sesamum indicum]
JMSF040E23Sequence682005036 (14)ref|XP_007047094.1|1e-103Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709851005036 (14)ref|XP_007047094.1|9e-103Cold-regulated 413-plasma membrane 2 isoform 1 [Theobroma cacao] ref|XP_00704709

Alignment

This contig is upended


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rJMFF037J23-                                                               ATAACCA
rJMFF011C24-                                                              TATAACCA
                      ____________________________________________________________
consensus                                                                 TATAACCA
 
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rJMFF037J23-          AGCAAACCATTCCAGATTCCAGTAGATTCAATATGACAGACAACCTAGTACTAAGACAAA
rJMFF037B23-                                TAGATTCAATATGACAGACAACCTAGTACTAAGACAAA
rJMFF032H15-                                TAGATTCAATATGACAGACAACCTAGTACTAAGACAAA
rJMFF011C24-          AGCAAACCATTCCAGATTCCAGTAGATTCAATATGACAGACAACCTAGTACTAAGACAAA
rJMSF016M16-                                        ATATGACAGACAACCTAGTACTAAGACAAA
rJMSF040E23-                                        ATATGACAGACAACCTAGTACTAAGACAAA
                      ____________________________________________________________
consensus             AGCAAACCATTCCAGATTCCAGTAGATTCAATATGACAGACAACCTAGTACTAAGACAAA
 
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rJMFF037J23-          CTCACCAACTTAACAAATCATCAGACAAAG-TCCATGATGAATATTGTACACAATCCAAG
rJMFF037B23-          CTCACCAACTTAACAAATCATCAGACAAAG-TCCATGATGAATATTGTACACAATCCAAG
rJMFF032H15-          CTCACCAACTTAACAAATCATCAGACAAAG-TCCATGATGAATATTGTACACAATCCAAG
rJMFF011C24-          CTCACCAACTTAACAAATCATCAGACAAAG-TCCATGATGAATATTGTACACAATCCAAG
rJMSF016M16-          CTCACCAACTTAACAAATCATCAGACAAAG-TCCATGATGAATATTGTACACAATCCAAG
rJMSF040E23-          CTCACCAACTTAACAAATCATCAGACAAAGTTCCATGATGAATATTGTACACAATCCAAG
                      ____________________________________________________________
consensus             CTCACCAACTTAACAAATCATCAGACAAAG-TCCATGATGAATATTGTACACAATCCAAG
 
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rJMFF037J23-          TTTTGCTTTCAACACAACCCAGAAAAACACAATTCTGGAATCCAGAAAGAGCTAATGGCA
rJMFF037B23-          TTTTGCTTTCAACACAACCCAGAAAAACACAATTCTGGAATCCAGAAAGAGCTAATGGCA
rJMFF032H15-          TTTTGCTTTCAACACAACCCAGAAAAACACAATTCTGGAATCCAGAAAGAGCTAATGGCA
rJMFF011C24-          TTTTGCTTTCAACACAACCCAGAAAAACACAATTCTGGAATCCAGAAAGAGCTAATGGCA
rJMSF016M16-          TTTTGCTTTCAACACAACCCAGAAAAACACAATTCTGGAATCCAGAAAGAGCTAATGGCA
rJMSF040E23-          TTTTGCTTTCAACACAACCCAGAAAAACACAATTCTGGAATCCAGAAAGAGCTAATGGCA
                      ____________________________________________________________
consensus             TTTTGCTTTCAACACAACCCAGAAAAACACAATTCTGGAATCCAGAAAGAGCTAATGGCA
 
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rJMFF037J23-          AACCATTGTCCAAACTCTGAGATGACCACTAATTCAGTGAACAAAATGAAGAACCAGAGA
rJMFF037B23-          AACCATTGTCCAAACTCTGAGATGACCACTAATTCAGTGAACAAAATGAAGAACCAGAGA
rJMFF032H15-          AACCATTGTCCAAACTCTGAGATGACCACTAATTCAGTGAACAAAATGAAGAACCAGAGA
rJMFF011C24-          AACCATTGTCCAAACTCTGAGATGACCACTAATTCAGTGAACAAAATGAAGAACCAGAGA
rJMSF016M16-          AACCATTGTCCAAACTCTGAGATGACCACTAATTCAGTGAACAAAATGAAGAACCAGAGA
JMSF040E23+                             GAGATGACCACTAATTCAGTGAACACAATGAAGAACCAGAGA
rJMSF040E23-          AACCATTGTCCAAACTCTGAGATGACCACTAATTCAGTGAACACAATGAAGAACCAGAGA
                      ____________________________________________________________
consensus             AACCATTGTCCAAACTCTGAGATGACCACTAATTCAGTGAACAAAATGAAGAACCAGAGA
 
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rJMFF037J23-          CCAGATTGGGTACACCAACAAGAGGATAATGCCTACTGTGTTCGATATACCATGGCTTTG
rJMFF037B23-          CCAGATTGGGTACACCAACAAGAGGATAATGCCTACTGTGTTCGATATACCATGGCTTTG
rJMFF032H15-          CCAGATTGGGTACACCAACAAGAGGATAATGCCTACTGTGTTCGATATACCATGGCTTTG
rJMFF011C24-          CCAGATTGGGTACACCAACAAGAGGATAATGCCTACTGTGTTCGATATACCATGGCTTTG
rJMSF016M16-          CCAGATTGGGTACACCAACAAGAGGATAATGCCTACTGTGTTCGATATACCATGGCTTTG
JMSF040E23+           CCAGATTGGGTACACCAACAAGAGGATAATGCCTACTGTGTTCGATATACCATGGCTTTG
rJMSF040E23-          CCAGATTGGGTACACCAACAAGAGGATAATGCCTACTGTGTTCGATATACCATGGCTTTG
                      ____________________________________________________________
consensus             CCAGATTGGGTACACCAACAAGAGGATAATGCCTACTGTGTTCGATATACCATGGCTTTG
 
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rJMFF037J23-          AGTGAAGGAATTGCGGAATCCACCAGACGCCCGGATGTGTTCTTGGAGCAGATAACAGCC
rJMFF037B23-          AGTGAAGGAATTGCGGAATCCACCAGACGCCCGGATGTGTTCTTGGAGCAGATAACAGCC
rJMFF032H15-          AGTGAAGGAATTGCGGAATCCACCAGACGCCCGGATGTGTTCTTGGAGCAGATAACAGCC
rJMFF011C24-          AGTGAAGGAATTGCGGAATCCACCAGACGCCCGGATGTGTTCTTGGAGCAGATAACAGCC
rJMSF016M16-          AGTGAAGGAATTGCGGAATCCACCAGACGCCCGGATGTGTTCTTGGAGCAGATAACAGCC
JMSF040E23+           AGTGAAGGAATTGCGGAATCCACCAGACGCCCGGATGTGTTCTTGGAGCAGATAACAGCC
JMFF037B23+                                                 GTTCTTGGAGCAGATAACAGCC
rJMSF040E23-          AGTGAAGGAATTGCGGAATCCACCAGACGCCCGGATGTGTTCTTGGAGCAGATAACAGCC
JMFF011C24+                                                     TTGGAGCAGATAACAGCC
JMFF037J23+                                                      TGGAGCAGATAACAGCC
                      ____________________________________________________________
consensus             AGTGAAGGAATTGCGGAATCCACCAGACGCCCGGATGTGTTCTTGGAGCAGATAACAGCC
 
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rJMFF037J23-          GATCACGAGACATATCGCTGTCCCAACCCAGCTCTCTCTTATGGTGTAAGCGAAGAAGTT
rJMFF037B23-          GATCACGAGACATATCGCTGTCCCAACCCAGCTCTCTCTTATGGTGTAAGCGAAGAAGTT
rJMFF032H15-          GATCACGAGACATATCGCTGTCCCAACCCAGCTCTCTCTTATGGTGTAAGCGAAGAAGTT
rJMFF011C24-          GATCACGAGACATATCGCTGTCCCAACCCAGCTCTCTCTTATGGTGTAAGCGAAGAAGTT
rJMSF016M16-          GATCACGAGACATATCGCTGTCCCAACCCAGCTCTCTCTTATGGTGTAAGCGAAGAAGTT
JMSF040E23+           GATCACGAGACATATCGCTGTCCCAACCCAGCTCTCTCTTATGGTGTAAGCGAAGAAGTT
JMFF037B23+           GATCACGAGACATATCGCTGTCCCAACCCAGCTCTCTCTTATGGTGTAAGCGAAGAAGTT
JMSF017M16+                                                        GTAAGCGAAGAAGTN
rJMSF040E23-          GATCACGAGACATATCGCTGTCCCAACCCAGCTCTCTCTTATGGTGTAAGCGAAGAAGTT
JMFF032H15+             TCACGAGACATATCGCTGTCCCAACCCAGCTCTCTCTTATGGTGTAAGCGAAGAAGTT
JMFF011C24+           GATCACGAGACATATCGCTGTCCCAACCCAGCTCTCTCTTATGGTGTAAGCGAAGAAGTT
JMFF037J23+           GATCACGAGACATATCGCTGTCCCAACCCAGCTCTCTCTTATGGTGTAAGCGAAGAAGTT
                      ____________________________________________________________
consensus             GATCACGAGACATATCGCTGTCCCAACCCAGCTCTCTCTTATGGTGTAAGCGAAGAAGTT
 
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rJMFF037J23-          GGGAGAAACCACGAGAAGTAGGATTAGCGAGCCAGGCATTTCCAACCAGTCTGGGAAATG
rJMFF037B23-          GGGAGAAACCACGAGAAGTAGGATTAGCGAGCCAGGCATTTCCAACCAGTCTGGGAAATG
rJMFF032H15-          GGGAGAAACCACGAGAAGTAGGATTAGCGAGCCAGGCATTTCCAACCAGTCTGGGAAATG
rJMFF011C24-          GGGAGAAACCACGAGAAGTAGGATTAGCGAGCCAGGCATTTCCAACCAGTCTGGGAAATG
rJMSF016M16-          GGGAGAAACCACGAGAAGTAGGATTAGCGAGCCAGGCATTTCCAACCAGTCTGGGAAATG
JMSF040E23+           GGGAGAAACCACGAGAAGTAGGATTAGCGAGCCAGGCATTTCCAACCAGTCTGGGAAATG
JMFF037B23+           GGGAGAAACCACGAGAAGTAGGATTAGCGAGCCAGGCATTTCCAACCAGTCTGGGAAATG
JMFF028G18+                                                   TCCAACCAGTCTGGGAAATG
JMSF017M16+           GGGAGAAACCACGAGAAGTAGGATTAGCGAGCCAGGCATTTCCAACCAGTCTGGGAAATG
rJMSF040E23-          GGGAGAAACCACGAGAAGTAGGATTAGCGAGCCAGGCATTTCCAACCAGTCTGGGAAATG
JMFF032H15+           GGGAGAAACCACGAGAAGTAGGATTAGCGAGCCAGGCATTTCCAACCAGTCTGGGAAATG
JMFF011C24+           GGGAGAAACCACGAGAAGTAGGATTAGCGAGCCAGGCATTTCCAACCAGTCTGGGAAATG
JMFF037J23+           GGGAGAAACCACGAGAAGTAGGATTAGCGAGCCAGGCATTTCCAACCAGTCTGGGAAATG
                      ____________________________________________________________
consensus             GGGAGAAACCACGAGAAGTAGGATTAGCGAGCCAGGCATTTCCAACCAGTCTGGGAAATG
 
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rJMFF037J23-          TCGTGGGAAGAACAGTCTTATCACGACTGCTACGAGAGCAATCCATTTCCCAACTTCTCC
rJMFF037B23-          TCGTGGGAAGAACAGTCTTATCACGACTGCTACGAGAGCAATCCATTTCCCAACTTCTCC
rJMFF032H15-          TCGTGGGAAGAACAGTCTTATCACGACTGCTACGAGAGCAATCCATTTCCCAACTTCTCC
rJMFF011C24-          TCGTGGGAAGAACAGTCTTATCACGACTGCTACGAGAGCAATCCATTTCCCAACTTCTCC
rJMSF016M16-          TCGTGGGAAGAACAGTCTTATCACGACTGCTACGAGAGCAATCCATTTCCCAACTTCTCC
JMSF040E23+           TCGTGGGAAGAACAGTCTTATCACGACTGCTACGAGAGCAATCCATTTCCCAACTTCTCC
JMFF037B23+           TCGTGGGAAGAACAGTCTTATCACGACTGCTACGAGAGCAATCCATTTCCCAACTTCTCC
JMFF028G18+           TCGTGGGAAGAACAGTCTTATCACGACTGCTACGAGAGCAATCCATTTCCCAANTTCTCC
JMSF017M16+           TCGTGGGAAGAACAGTCTTATCACGACTGCTACGAGAGCAATCCATTTCCCAACTTCTCC
rJMSF040E23-          TCGTGGGAAGAACAGTCTTATCACGACTGCTACGAGAGCAATCCATTTCCCAACTTCTCC
JMFF032H15+           TCGTGGGAAGAACAGTCTTATCACGACTGCTACGAGAGCAATCCATTTCCCAACTTCTCC
JMFF011C24+           TCGTGGGAAGAACAGTCTTATCACGACTGCTACGAGAGCAATCCATTTCCCAACTTCTCC
JMFF037J23+           TCGTGGGAAGAACAGTCTTATCACGACTGCTACGAGAGCAATCCATTTCCCAACTTCTCC
JMSF016M16+             GTGGGAAGAACAGTNTNNTCANGANTGNTACGAGAGCAATCCATTTCCCAACTTCTCC
                      ____________________________________________________________
consensus             TCGTGGGAAGAACAGTCTTATCACGACTGCTACGAGAGCAATCCATTTCCCAACTTCTCC
 
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rJMFF037J23-          CCTTAAAAGGTTAAATAACACATCAGGAAAACTTAAGAAGATGTAAGGGATTAGAAGCGC
rJMFF037B23-          CCTTAAAAGGTTAAATAACACATCAGGAAAACTTAAGAAGATGTAAGGGATTAGAAGCGC
rJMFF032H15-          CCTTAAAAGGTTAAATAACACATCAGGAAAACTTAAGAAGATGTAAGGGATTAGAAGCGC
rJMFF011C24-          CCTTAAAAGGTTAAATAACACATCAGGAAAACTTAAGAAGATGTAAGGGATTAGAAGCGC
rJMSF016M16-          CCTTAAAAGGTTAAATAACACATCAGGAAAACTTAAGAAGATGTAAGGGATTAGAAGCGC
JMSF040E23+           CCTTAAAAGGTTAAATAACACATCAGGAAAACTTAAGAAGATGTAAGGGATTAGAAGCGC
JMFF037B23+           CCTTAAAAGGTTAAATAACACATCAGGAAAACTTAAGAAGATGTAAGGGATTAGAAGCGC
JMFF028G18+           CCTTAAAAGGTTAAATAACACATCAGGAAAACTTAAGAAGATGTAAGGGATTAGAAGCGC
JMSF017M16+           CCTTAAAAGGTTAAATAACACATCAGGAAAACTTAAGAAGATGTAAGGGATTAGAAGCGC
rJMSF040E23-          CCTTAAAAGGTTAAATAACACATCAGGAAAACTTAAGAAGATGTAAGGGATTAGAAGCGC
JMFF032H15+           CCTTAAAAGGTTAAATAACACATCAGGAAAACTTAAGAAGATGTAAGGGATTAGAAGCGC
JMFF011C24+           CCTTAAAAGGTTAAATAACACATCAGGAAAACTTAAGAAGATGTAAGGGATTAGAAGCGC
JMFF037J23+           CCTTAAAAGGTTAAATAACACATCAGGAAAACTTAAGAAGATGTAAGGGATTAGAAGCGC
JMSF016M16+           CCTTAAAAGGTTAAATAACACATCAGGAAAACTTAAGAAGATGTAAGGGATTAGAAGCGC
                      ____________________________________________________________
consensus             CCTTAAAAGGTTAAATAACACATCAGGAAAACTTAAGAAGATGTAAGGGATTAGAAGCGC
 
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rJMFF037J23-          GGTCAGCATGTTTGTTCTCCAGTTTGTTCGGTCCAATATGAGCAAATAAATGGCGGCAAA
rJMFF037B23-          GGTCAGCATGTTTGTTCTCCAGTTTGTTCGGTCCAATATGAGCAAATAAATGGCGGCAAA
rJMFF032H15-          GGTCAGCATGTTTGTTCTCCAGTTTGTCCGGTCCAATATGAGCAAATAAATGGCGGCAAA
rJMFF011C24-          GGTCAGCATGTTTGTTCTCCAGTTTGTTCGGTCCAATATGAGCAAATAAATGGCGGCAAA
rJMSF016M16-          GGTCAGCATGTTTGTTCTCCAGTTTGTTCGGTCCAATATGAGCAAATAAATGGCGGCAAA
JMSF040E23+           GGTCAGCATGTTTGTTCTCCAGTTTGTTCGGTCCAATATGAGCAAATAAATGGCGGCAAA
JMFF037B23+           GGTCAGCATGTTTGTTCTCCAGTTTGTTCGGTCCAATATGAGCAAATAAATGGCGGCAAA
JMFF028G18+           GGTCAGCATGTTTGTTCTCCAGTTTGTTCGGTCCAATATGAGCAAATAAATGGCGGCAAA
JMSF017M16+           GGTCAGCATGTTTGTTCTCCAGTTTGTTCGGTCCAATATGAGCAAATA            
rJMSF040E23-          GGTCAGCATGTTTGTTCTCCAGTTTGTTCGGTCCAATATGAGCAAATAAATGGCGGCAAA
JMFF032H15+           GGTCAGCATGTTTGTTCTCCAGTTTGTCCGGTCCAATATGAGCAAATAAATGGCGGCAAA
JMFF011C24+           GGTCAGCATGTTTGTTCTCCAGTTTGTTCGGTCCAATATGAGCAAATAAATGGCGGCAAA
JMFF037J23+           GGTCAGCATGTTTGTTCTCCAGTTTGTTCGGTCCAATATGAGCAAATAAATGGCGGCAAA
JMSF016M16+           GGTCAGCATGTTTGTTCTCCAGTTTGTTCGGTCCAATATGAGCAAATAAATGGCGGCAAA
                      ____________________________________________________________
consensus             GGTCAGCATGTTTGTTCTCCAGTTTGTTCGGTCCAATATGAGCAAATAAATGGCGGCAAA
 
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rJMFF037J23-          GGAGGCGACCCATTTAAGAAAAGAAGTGCCGAAGCC                        
rJMFF037B23-          GGAGGCGACCCATTTAAGAAAAGAAGTGCCGAAGCCGA                      
rJMFF032H15-          GGAGGCGACCCATTTAAGAAA                                       
rJMFF011C24-          GGAGGCGACCCATTTAAGAAAAGAAGTGCCGAAGCCGA                      
rJMSF016M16-          GGAGGCGACCCATTTAAGAAAAGAAGTGCCGAAGCCGAGACCGCCGAGGTTGGCGGCGTG
JMSF040E23+           GGAGGCGACCCATTTAAGAAAAGAAGTGCCGAAGCCGAGACCGCCGAGGTTGGCGGCGTG
JMFF037B23+           GGAGGCGACCCATTTAAGAAAAGAAGTGCCGAAGCCGAGACCGCCGAGGTTGGCGGCGTG
JMFF028G18+           GGAGGCGACCCATTTAAGAAAAGAAGTGCCGAAGCCGAGACCGCCGAGGTTGGCGGCGTG
rJMSF040E23-          GGAGGCGACCCATTTAAGAAAAGAAGTGCCGAAGCCGAGACCGCCGAGGTTGGCGGCGTG
JMFF032H15+           GGAGGCGACCCATTTAAGAAAAGAAGTGCCGAAGCCGAGACCGCCGAGGTTGGCGGCGTG
JMFF011C24+           GGAGGCGACCCATTTAAGAAAAGAAGTGCCGAAGCCGAGACCGCCGAGGTTGGCGGCGTG
JMFF037J23+           GGAGGCGACCCATTTAAGAAAAGAAGTGCCGAAGCCGAGACCGCCGAGGTTGGCGGCGTG
JMSF016M16+           GGAGGCGACCCATTTAAGAAAAGAAGTGCCGAAGCCGAGACCGCCGAGGTTGGCGGCGTG
                      ____________________________________________________________
consensus             GGAGGCGACCCATTTAAGAAAAGAAGTGCCGAAGCCGAGACCGCCGAGGTTGGCGGCGTG
 
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rJMSF016M16-          TTTAAGGAGGTTGTTGGCGGCGGCCTTGAGGTCTCTGAGGTCGGCATTGATGAGTTCCTG
JMSF040E23+           TTTAAGGAGGTTGTTGGCGGCGGCCTTGAGGTCTCTGAGGTCGGCATTGATGAGTTCCTG
JMFF037B23+           TTTAAGGAGGTTGTTGGCGGCGGCCTTGAGGTCTCTGAGGTCGGCATTGATGAGTTCCTG
JMFF028G18+           TTTAAGGAGGTTGTTGGCGGCGGCCTTGAGGTCTCTGAGGTCGGCATTGATGAGTTCCTG
rJMSF040E23-          TTTAAGGAGGTTGTTGGCGGCGGCCTTGAGGTCTCTGAGGTCGGCATTGATGAGTTCCTG
JMFF032H15+           TTTAAGGAGGTTGTTGGCGGCGGCCTTGAGGTCTCTGAGGTCGGCATTGATGAGTTCCTG
JMFF011C24+           TTTAAGGAGGTTGTTGGCGGCGGCCTTGAGGTCTCTGAGGTCGGCATTGATGAGTTCCTG
JMFF037J23+           TTTAAGGAGGTTGTTGGCGGCGGCCTTGAGGTCTCTGAGGTCGGCATTGATGAGTCCCTG
JMSF016M16+           TTTAAGGAGGTTGTTGGCGGCGGCCTTGAGGTCTCTGAGGTCGGCATTGATGAGTTCCTG
                      ____________________________________________________________
consensus             TTTAAGGAGGTTGTTGGCGGCGGCCTTGAGGTCTCTGAGGTCGGCATTGATGAGTTCCTG
 
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rJMSF016M16-          GCCGGAAACTTCATCGGTCTNCATAGCCNAGTA                           
JMSF040E23+           GCCGGAAACTTCATCGGTCTTCATAGCCAAGTAATCCATCCTCCTCATTTCCCTTCTCCC
JMFF037B23+           GCCGGAAACTTCATCGGTCTTCATAGCCAAGTAATCCATCCTCCTCATTTCCCTTCTCCC
JMFF028G18+           GCCGGAAACTTCATCGGTCTTCATAGCCAAGTAATCCATCCTCCTCATTTCCCTTCTCCC
rJMSF040E23-          GCCGGAAACTTCATCGGTCTTCATAGCCAAGTAATCCATCCTCCTCATTTCCCTTCTCCC
JMFF032H15+           GCCGGAAACTTCATCGGTCTTCATAGCCAAGTAATCCATCCTCCTCATTTCCCTTCTCCC
JMFF011C24+           GCCGGAAACTTCATCGGTCTTCATAGCCAAGTAATCCATCCTCCTCATTTCCCTTCTCCC
JMFF037J23+           GCCGGAAACTTCATCGGTCTTCATAGCCAAGTAATCCATCCTCCTCATTTCCCTTCTCCC
JMSF016M16+           GCCGGAAACTTCATCGGTCTTCATAGCCAAGTAATCCATCCTCCTCATTTCCCTTCTCCC
                      ____________________________________________________________
consensus             GCCGGAAACTTCATCGGTCTTCATAGCCAAGTAATCCATCCTCCTCATTTCCCTTCTCCC
 
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JMSF040E23+           ACAGATCTGCTTCTGATCTTCTTCTATCCACAAAACCAC                     
JMFF037B23+           ACAGATCTGCTTCTGATCTTCTTCTATCCACAAAACCAC                     
JMFF028G18+           ACAGATCTGCTTCTGATCTTCTTCTATCCACAAAACCAC                     
rJMSF040E23-          ACAGATCTGCTTCTGATCTTCTTCTATCCACAAAACCAC                     
JMFF032H15+           ACAGATCTGCTTCTGATCTTCTTCTATCCACAAAACCACAGAGATCA             
JMFF011C24+           ACAGATCTGCTTCTGATCTTCTTCTATCCACAAAACCACAGAGATCA             
JMFF037J23+           ACAGATCTGCTTCTGATCTTCTTCTATCCACAAAACCACAGAGATCA             
JMSF016M16+           ACAGATCTGCTTCTGATCTTCTTCTATCCACAAAACCACAGAGATCAATCAATACCCCTC
                      ____________________________________________________________
consensus             ACAGATCTGCTTCTGATCTTCTTCTATCCACAAAACCACAGAGATCAATCAATACCCCTC