clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF015A11 | Sequence | 423 | 000607 (11) | ref|XP_009608415.1| | 1e-22 | PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Nicotiana tomentosiformis] | 670 | 000607 (11) | ref|XP_009608415.1| | 7e-41 | PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Nicotiana tomentosiformis] |
JMSF006O06 | Sequence | 304 | 000607 (11) | ref|XP_009608415.1| | 6e-06 | PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Nicotiana tomentosiformis] | 237 | 016011 | |||
JMSF020A06 | Sequence | 686 | 000607 (11) | ref|XP_009608415.1| | 3e-61 | PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Nicotiana tomentosiformis] | 644 | 000607 (11) | ref|XP_009608415.1| | 7e-59 | PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Nicotiana tomentosiformis] |
JMSF021M08 | Sequence | 653 | 000607 (11) | ref|XP_009608415.1| | 2e-61 | PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Nicotiana tomentosiformis] | 639 | 000607 (11) | ref|XP_009608415.1| | 1e-56 | PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Nicotiana tomentosiformis] |
JMSF033E17 | Sequence | 686 | 000607 (11) | ref|XP_009608415.1| | 2e-60 | PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Nicotiana tomentosiformis] | 639 | 000607 (11) | ref|XP_009608415.1| | 4e-57 | PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Nicotiana tomentosiformis] |
JMSF035B22 | Sequence | 689 | 000607 (11) | ref|XP_009608415.1| | 3e-61 | PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Nicotiana tomentosiformis] | 569 | 000607 (11) | ref|XP_009608415.1| | 3e-42 | PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000607============================================ 893 2 ---------------------------------------------->JMFF015A11 <--------------------------------------------------------------------------rJMFF015A11 26 ------------------------------------------------------------------------>JMSF021M08 <-----------------------------------------------------------------------rJMSF021M08 26 ---------------------------------------------------------------------------->JMSF020A06 <-----------------------------------------------------------------------rJMSF020A06 26 ---------------------------------------------------------------------------->JMSF033E17 <-----------------------------------------------------------------------rJMSF033E17 28 ---------------------------------------------------------------------------->JMSF035B22 <---------------------------------------------------------------rJMSF035B22
The following clones don't have the opposite end in this pair.
--------------------------------->JMSF006O06#