clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF047B08 | Sequence | 680 | 005944 (20) | ref|XP_009771859.1| | 8e-47 | PREDICTED: photosystem II 22 kDa protein, chloroplastic [Nicotiana sylvestris] | 129 | 024681 | ref|XP_004970722.1| | 1e-05 | PREDICTED: photosystem II 22 kDa protein, chloroplastic-like [Setaria italica] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
Contig24681 is a singlet.SCORE============================================Contig005944============================================1208 ============================================Contig024681============================================ -------------------------------------->JMSF012K11# ------------------------------------------------------->JMSF047B08# ---------------->rJMFF029E16- ----------------------------------------------->JMFF010E16- ----------------------------------------------->JMFF034H18- ------------------------------>JMFS085H02- ----------------------------------------------->JMFF033L21- ----------------------------------------------->JMFF008B10- --------------------------------------------->JMFF029C21- ------------------------------------------->JMFF033K22- -------------------------------------------------->JMFN008L17- ----------------------------------------------->JMFF017C17# <---------------------------------------rJMFF046L07** ---------------------------------------------------->JMFF042P24** ------>rJMFF025B20** -------------------------------------->JMFF046P10** <--------------------------------------rJMFF046P10** ----------------------------------------------->JMFF046L07** <-------------------------------------------rJMFF042P24** --------------------------------------------->JMFF025B20**