| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF012C02 | Sequence | 609 | 008821 (12) | emb|CDO99108.1| | 3e-126 | unnamed protein product [Coffea canephora] | 806 | 008821 (12) | emb|CDO99108.1| | 9e-126 | unnamed protein product [Coffea canephora] |
| JMFF018B19 | Sequence | 478 | 008821 (12) | emb|CDO99108.1| | 1e-91 | unnamed protein product [Coffea canephora] | 303 | 016951 | ref|XP_011073456.1| | 2e-04 | PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 [Sesamum indi |
| JMFF024O21 | Sequence | 523 | 008821 (12) | emb|CDO99108.1| | 2e-96 | unnamed protein product [Coffea canephora] | 776 | 008821 (12) | ref|XP_010525225.1| | 2e-124 | PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 [Tarenaya has |
| JMFF034C09 | Sequence | 533 | 008821 (12) | emb|CDO99108.1| | 6e-98 | unnamed protein product [Coffea canephora] | 694 | 008821 (12) | ref|XP_010525225.1| | 7e-105 | PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 [Tarenaya has |
| JMFF040K01 | Sequence | 691 | 008821 (12) | ref|XP_010525225.1| | 6e-105 | PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 [Tarenaya has | |||||
| JMFN003F08 | Sequence | 634 | 008821 (12) | ref|XP_009587300.1| | 2e-132 | PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 {ECO:0000255| | |||||
| JMFN009E01 | Sequence | 614 | 008821 (12) | ref|XP_011073456.1| | 2e-71 | PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 [Sesamum indi | |||||
| JMSF001P08 | Sequence | 224 | 008821 (12) | ref|XP_009587300.1| | 1e-21 | PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 {ECO:0000255| | 769 | 008821 (12) | emb|CDO99108.1| | 4e-126 | unnamed protein product [Coffea canephora] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig008821============================================ 931 64 -------------------------------------------------------->JMFF034C09 <--------------------------------------------------------------------------rJMFF034C09 69 ------------------------------------------------------->JMFF024O21 <----------------------------------------------------------------------------------rJMFF024O21 90 ----------------------->JMSF001P08 <----------------------------------------------------------------------------------rJMSF001P08 167 ---------------------------------------------------------------->JMFF012C02 <-----------------------------------------------------------------------------rJMFF012C02
The following clones don't have the opposite end in this pair.
<-----------------------------------------------------------------JMFN009E01- <-------------------------------------------------------------------------rJMFF040K01- -------------------------------------------------->JMFF018B19# ------------------------------------------------------------------->JMFN003F08-