| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF016K17 | Sequence | 597 | 004984 (6) | emb|CDP18531.1| | 1e-84 | unnamed protein product [Coffea canephora] | 768 | 004984 (6) | ref|XP_010057240.1| | 5e-125 | PREDICTED: 40S ribosomal protein S2-4-like [Eucalyptus grandis] gb|KCW90198.1| h |
| JMSF004M05 | Sequence | 387 | 015656 | ref|XP_009772597.1| | 9e-60 | PREDICTED: transcription factor TGA2-like isoform X3 [Nicotiana sylvestris] | 258 | 004984 (6) | ref|XP_011069984.1| | 5e-11 | PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum] |
| JMSF004O07 | Sequence | 238 | 004984 (6) | gb|KEH40624.1| | 3e-11 | 40S ribosomal protein S2-4 [Medicago truncatula] | |||||
| JMSF008N07 | Sequence | 239 | 004984 (6) | gb|KEH40624.1| | 3e-12 | 40S ribosomal protein S2-4 [Medicago truncatula] | 718 | 004984 (6) | ref|XP_010057240.1| | 3e-132 | PREDICTED: 40S ribosomal protein S2-4-like [Eucalyptus grandis] gb|KCW90198.1| h |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig004984============================================ 970 110 ----------------------->JMSF008N07 <----------------------------------------------------------------rJMSF008N07 148 -------------------------------------------------------->JMFF016K17 <------------------------------------------------------------rJMFF016K17
The following clones don't have the opposite end in this pair.
------------->JMSF004O07- <--------------------------rJMSF004M05#