| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF001C04 | Sequence | 368 | 020559 | ref|XP_009772022.1| | 6e-35 | PREDICTED: protein SRG1-like [Nicotiana sylvestris] | 381 | 000563 (13) | ref|XP_009772022.1| | 2e-24 | PREDICTED: protein SRG1-like [Nicotiana sylvestris] |
| JMFN033B21 | Sequence | 617 | 000563 (13) | ref|XP_009772022.1| | 7e-84 | PREDICTED: protein SRG1-like [Nicotiana sylvestris] | |||||
| JMFS147F01 | Sequence | 634 | 000563 (13) | ref|XP_009772022.1| | 2e-84 | PREDICTED: protein SRG1-like [Nicotiana sylvestris] | |||||
| JMSF003G01 | Sequence | 379 | 000563 (13) | ref|XP_007022033.1| | 2e-36 | Senescence-related gene 1 [Theobroma cacao] gb|EOY13558.1| Senescence-related ge | 689 | 000563 (13) | ref|XP_006355578.1| | 7e-75 | PREDICTED: protein SRG1-like [Solanum tuberosum] |
| JMSF046B15 | Sequence | 745 | 000563 (13) | ref|XP_002269087.1| | 2e-103 | PREDICTED: protein SRG1 [Vitis vinifera] emb|CBI30797.3| unnamed protein product | 653 | 000563 (13) | ref|XP_004233003.1| | 1e-65 | PREDICTED: protein SRG1-like [Solanum lycopersicum] |
| JMSF046E01 | Sequence | 251 | 000563 (13) | 207 | 000563 (13) | ||||||
| JMSF046P12 | Sequence | 685 | 000563 (13) | ref|XP_002269087.1| | 5e-90 | PREDICTED: protein SRG1 [Vitis vinifera] emb|CBI30797.3| unnamed protein product | 507 | 000563 (13) | ref|XP_009772022.1| | 2e-34 | PREDICTED: protein SRG1-like [Nicotiana sylvestris] |
| JMSF052A11 | Sequence | 653 | 000563 (13) | ref|XP_002269087.1| | 8e-83 | PREDICTED: protein SRG1 [Vitis vinifera] emb|CBI30797.3| unnamed protein product | 944 | 000563 (13) | ref|XP_009772022.1| | 1e-114 | PREDICTED: protein SRG1-like [Nicotiana sylvestris] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig000563============================================1357 34 -------------------------->JMSF003G01 <--------------------------------------------------rJMSF003G01 35 ----------------------------------------------->JMSF052A11 <--------------------------------------------------------------------rJMSF052A11 35 ------------------------------------------------->JMSF046P12 <-----------------------------------rJMSF046P12 246 ------------------------------------------------------>JMSF046B15 <-------------------------------rJMSF046B15 1150 ----------------->JMSF046E01 <--------------rJMSF046E01
The following clones don't have the opposite end in this pair.
<----------------rJMFF001C04# --------------------------------->JMFS147F01- ------------------------------------------->JMFN033B21-