List of clones in pair P006411.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006K14Sequence553001593 (14)ref|XP_009787242.1|3e-66PREDICTED: scarecrow-like protein 8 [Nicotiana sylvestris]
JMFF007M14Sequence613001593 (14)ref|NP_001234327.1|6e-42GRAS10 protein [Solanum lycopersicum] gb|ABD72965.1| GRAS10 [Solanum lycopersicu665001593 (14)ref|XP_009787242.1|6e-90PREDICTED: scarecrow-like protein 8 [Nicotiana sylvestris]
JMFF009G05Sequence535001593 (14)ref|NP_001234327.1|6e-37GRAS10 protein [Solanum lycopersicum] gb|ABD72965.1| GRAS10 [Solanum lycopersicu740001593 (14)ref|XP_009614056.1|8e-103PREDICTED: scarecrow-like protein 8 [Nicotiana tomentosiformis]
JMFF024E03Sequence195001593 (14)ref|XP_006353907.1|5e-25PREDICTED: scarecrow-like protein 8-like [Solanum tuberosum]
JMFF028L07Sequence504001593 (14)ref|NP_001234327.1|8e-35GRAS10 protein [Solanum lycopersicum] gb|ABD72965.1| GRAS10 [Solanum lycopersicu665001593 (14)ref|XP_006353907.1|2e-92PREDICTED: scarecrow-like protein 8-like [Solanum tuberosum]
JMFF048N23Sequence316004668 (3)306001593 (14)ref|XP_006353907.1|1e-16PREDICTED: scarecrow-like protein 8-like [Solanum tuberosum]
JMFN036E11Sequence609001593 (14)ref|NP_001234327.1|6e-65GRAS10 protein [Solanum lycopersicum] gb|ABD72965.1| GRAS10 [Solanum lycopersicu
JMFS084B09Sequence617001593 (14)gb|AIE54282.1|3e-95GRAS10 protein [Nicotiana tabacum]
JMFS099E08Sequence624001593 (14)ref|XP_009787242.1|1e-99PREDICTED: scarecrow-like protein 8 [Nicotiana sylvestris]
JMFS101F03Sequence517004668 (3)ref|XP_002272471.1|5e-22PREDICTED: scarecrow-like protein 8 [Vitis vinifera]
JMFS118F11Sequence616004668 (3)ref|XP_002272471.1|7e-25PREDICTED: scarecrow-like protein 8 [Vitis vinifera]
JMFS141E09Sequence529001593 (14)ref|XP_006353907.1|2e-81PREDICTED: scarecrow-like protein 8-like [Solanum tuberosum]
JMSF047H16Sequence635001593 (14)ref|XP_009787242.1|2e-110PREDICTED: scarecrow-like protein 8 [Nicotiana sylvestris]

Contig 1593 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig001593============================================1322         
 157 ------------------------------------->JMFF028L07                                                                 
                                                   <-----------------------------------------rJMFF028L07  
 157 ---------------------------------------->JMFF009G05                                                              
                                              <----------------------------------------------rJMFF009G05  
 157 --------------------------------------------->JMFF007M14                                                         
                                                   <-----------------------------------------rJMFF007M14

The following clones don't have the opposite end in this pair.

                                                                             <--------------rJMFF024E03-              
                                         ---------------------------------------------->JMFS099E08-                   
                         ---------------------------------------------->JMFS084B09-                                   
                                            <-----------------------------------------------rJMSF047H16-              
                                                          ---------------------------------->JMFS141E09-              
      --------------------------------------------->JMFN036E11-                                                       
                                                 <--------------------------------------rJMFF006K14-                  
                                                                                  <----------------------rJMFF048N23*