Contig 004668:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF048N23Sequence316004668 (3)306001593 (14)ref|XP_006353907.1|1e-16PREDICTED: scarecrow-like protein 8-like [Solanum tuberosum]
JMFS101F03Sequence517004668 (3)ref|XP_002272471.1|5e-22PREDICTED: scarecrow-like protein 8 [Vitis vinifera]
JMFS118F11Sequence616004668 (3)ref|XP_002272471.1|7e-25PREDICTED: scarecrow-like protein 8 [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS101F03+ AATCGGGACGCC
JMFS118F11+ AGGCCGGAATTGTTGAAGAATCGGGACGCC
                      ____________________________________________________________
consensus AGGCCGGAATTGTTGAAGAATCGGGACGCC
 
. : . : . : . : . : . :
JMFS101F03+ GTACCTCGCGTTCATCGCCGGAGAATTTGAATTCGAAGAAATCGAGGACAGCGCCGACAA
JMFS118F11+ GTACCTCGCGTTCATCGCCGGAGAATTTGAATTCGAAGAAATCGAGGACAGCGCCGACAA
                      ____________________________________________________________
consensus GTACCTCGCGTTCATCGCCGGAGAATTTGAATTCGAAGAAATCGAGGACAGCGCCGACAA
 
. : . : . : . : . : . :
JMFS101F03+ ATCCACCGGCGAGAGAGGAGAAATCGGAGAACTGTGCTGATAAGTTCGAGGCTTAACGTT
JMFS118F11+ ATCCACCGGCGAGAGAGGAGAAATCGGAGAACTGTGCTGATAAGTTCGAGGCTTAACGTT
                      ____________________________________________________________
consensus ATCCACCGGCGAGAGAGGAGAAATCGGAGAACTGTGCTGATAAGTTCGAGGCTTAACGTT
 
. : . : . : . : . : . :
JMFS101F03+ CCGAAGATAAAGCCCTAGCGCCCCTTGCCGCTGTTGCTGGAGGAATTGCAGTTGCTGCTG
JMFS118F11+ CCGAAGATAAAGCCCTAGCGCCCCTTGCCGCTGTTGCTGGAGGAATTGCAGTTGCTGCTG
                      ____________________________________________________________
consensus CCGAAGATAAAGCCCTAGCGCCCCTTGCCGCTGTTGCTGGAGGAATTGCAGTTGCTGCTG
 
. : . : . : . : . : . :
JMFS101F03+ CTGCTGTTGAAACTCCACCAGCGACCTTTTCCCGATCAAATCGGACCTCCGATGTGCGAT
JMFS118F11+ CTGCTGTTGAAACTCCACCAGCGACCTTTTCCCGATCAAATCGGACCTCCGATGTGCGAT
                      ____________________________________________________________
consensus CTGCTGTTGAAACTCCACCAGCGACCTTTTCCCGATCAAATCGGACCTCCGATGTGCGAT
 
. : . : . : . : . : . :
JMFS101F03+ CTGAGAAGCCGGGTCGGACACAATTCCGGGGAGCTGAGACCCATAAGGAACTTGCACTCC
JMFS118F11+ CTGAGAAGCCGGGTCGGACACAATTCCGGGGAGCTGAGACCCATAAGGAACTTGCACTCC
JMFF048N23+ AAGGAACTTGCACTCC
                      ____________________________________________________________
consensus CTGAGAAGCCGGGTCGGACACAATTCCGGGGAGCTGAGACCCATAAGGAACTTGCACTCC
 
. : . : . : . : . : . :
JMFS101F03+ CCCCTGCATAAGATTCCCGATATTATTCCCCACGGGGACAGATCTTCCGTTGGAGATCCC
JMFS118F11+ CCCCTGCATAAGATTCCCGATATTATTCCCCACGGGGACAGATCTTCCGTTGGAGATCCC
JMFF048N23+ CCCCTGCATAAGATTCCCGATATTATTCCCCACGGGGACAGATCTTCCGTTGGAGATCCC
                      ____________________________________________________________
consensus CCCCTGCATAAGATTCCCGATATTATTCCCCACGGGGACAGATCTTCCGTTGGAGATCCC
 
. : . : . : . : . : . :
JMFS101F03+ GTCGGGACCGCCGTAAAATTCCTGAACGCTGCCGGGAAACCCAGACGACATTTTTGTCTC
JMFS118F11+ GTCGGGACCGCCGTAAAATTCCTGAACGCTGCCGGGAAACCCAGACGACATTTTTGTCTC
JMFF048N23+ GTCGGGACCGCCGTAAAATTCCTGAACGCTGCCGGGAAACCCAGACGACATTTTTGTCTC
                      ____________________________________________________________
consensus GTCGGGACCGCCGTAAAATTCCTGAACGCTGCCGGGAAACCCAGACGACATTTTTGTCTC
 
. : . : . : . : . : . :
JMFS101F03+ CGGCGAATAATCTCCCAATCGTTTGTAGCCACTACAGAAGAAGGTGTGGGATTTCAACAA
JMFS118F11+ CGGCGAATAATCTCCCAATCGTTTGTAGCCACTACAGAAGAAGGTGTGGGATTTCAACAA
JMFF048N23+ CGGCGAATAATCTCCCAATCGTTTGTAGCCACTACAGAAGAAGGTGTGGGATTTCAACAA
                      ____________________________________________________________
consensus CGGCGAATAATCTCCCAATCGTTTGTAGCCACTACAGAAGAAGGTGTGGGATTTCAACAA
 
. : . : . : . : . : . :
JMFS101F03+ AATTCTGCATTACACACACGAAAAA
JMFS118F11+ AATTCTGCATTACACACACGAAAAAAGGCAG
JMFF048N23+ AATTCTGCATTACACACACGAAAAAAGGCAGXXXXXXXXXXXXXXXXXXXXXXXAGAGAG
                      ____________________________________________________________
consensus AATTCTGCATTACACACACGAAAAAAGGCAGNNNNNNNNNNNNNNNNNNNNNNNAGAGAG
 
. : . : . : . : . : . :
JMFF048N23+ AGAAGGTGGAGAAAAGTGTAGAGAGAGAAAGAAAAAAAGGAATGAAGGCAGCTTCGTTTT
                      ____________________________________________________________
consensus AGAAGGTGGAGAAAAGTGTAGAGAGAGAAAGAAAAAAAGGAATGAAGGCAGCTTCGTTTT