clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF014I13 | Sequence | 440 | 011997 (8) | emb|CDP14289.1| | 1e-25 | unnamed protein product [Coffea canephora] | |||||
JMFF035K14 | Sequence | 517 | 009909 (9) | ref|XP_007021637.1| | 6e-17 | Basic-leucine zipper transcription factor family protein [Theobroma cacao] gb|E | 692 | 009909 (9) | gb|ABP88237.1| | 1e-46 | transcription factor bZIP112 [Glycine max] |
JMFF039M17 | Sequence | 568 | 009909 (9) | gb|KJB13235.1| | 4e-26 | hypothetical protein B456_002G064900 [Gossypium raimondii] | 745 | 009909 (9) | ref|XP_009627193.1| | 8e-63 | PREDICTED: basic leucine zipper 61-like [Nicotiana tomentosiformis] |
JMFN013P19 | Sequence | 481 | 011997 (8) | emb|CDP14289.1| | 1e-25 | unnamed protein product [Coffea canephora] | |||||
JMFN019D21 | Sequence | 219 | 011997 (8) | ||||||||
JMFN030M10 | Sequence | 462 | 011997 (8) | emb|CDP14289.1| | 1e-25 | unnamed protein product [Coffea canephora] | |||||
JMFS015G06 | Sequence | 459 | 011997 (8) | emb|CDP14289.1| | 7e-25 | unnamed protein product [Coffea canephora] | |||||
JMFS041G11 | Sequence | 474 | 011997 (8) | emb|CDP14289.1| | 1e-25 | unnamed protein product [Coffea canephora] | |||||
JMFS077F07 | Sequence | 484 | 011997 (8) | emb|CDP14289.1| | 1e-25 | unnamed protein product [Coffea canephora] | |||||
JMSF010B07 | Sequence | 226 | 009909 (9) | 766 | 009909 (9) | gb|ABP88237.1| | 3e-40 | transcription factor bZIP112 [Glycine max] | |||
JMSF021I12 | Sequence | 490 | 011997 (8) | emb|CDP14289.1| | 1e-25 | unnamed protein product [Coffea canephora] | 231 | 009909 (9) | |||
JMSF037P03 | Sequence | 676 | 009909 (9) | gb|KJB13236.1| | 8e-31 | hypothetical protein B456_002G064900 [Gossypium raimondii] | 664 | 009909 (9) | ref|XP_009627193.1| | 4e-65 | PREDICTED: basic leucine zipper 61-like [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig009909============================================1613 87 ------------->JMSF010B07 <---------------------------------------------rJMSF010B07 88 ------------------------------->JMFF035K14 <-----------------------------------------rJMFF035K14 215 ---------------------------------->JMFF039M17 <---------------------------------------------rJMFF039M17 329 ----------------------------------------->JMSF037P03 <----------------------------------------rJMSF037P03
The following clones don't have the opposite end in this pair.
<-----------rJMSF021I12*