Contig 011997:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014I13Sequence440011997 (8)emb|CDP14289.1|1e-25unnamed protein product [Coffea canephora]
JMFN013P19Sequence481011997 (8)emb|CDP14289.1|1e-25unnamed protein product [Coffea canephora]
JMFN019D21Sequence219011997 (8)
JMFN030M10Sequence462011997 (8)emb|CDP14289.1|1e-25unnamed protein product [Coffea canephora]
JMFS015G06Sequence459011997 (8)emb|CDP14289.1|7e-25unnamed protein product [Coffea canephora]
JMFS041G11Sequence474011997 (8)emb|CDP14289.1|1e-25unnamed protein product [Coffea canephora]
JMFS077F07Sequence484011997 (8)emb|CDP14289.1|1e-25unnamed protein product [Coffea canephora]
JMSF021I12Sequence490011997 (8)emb|CDP14289.1|1e-25unnamed protein product [Coffea canephora]231009909 (9)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS015G06+ AGCGTAGAAAAAACAGTTTGTGCTTCAATTTAGGCAAGTATGGTTGGAGTATAAACAAA
JMFS041G11+ AGCGTAGAAAAAACAGTTTGTGCTTCAATTTAGGCAAGTATGGTTGGAGTATAAACAAA
JMFN030M10+ AAACAAA
JMFN013P19+ ATAAACAAA
JMFS077F07+ ATAAACAAA
                      ____________________________________________________________
consensus AGCGTAGAAAAAACAGTTTGTGCTTCAATTTAGGCAAGTATGGTTGGAGTATAAACAAA
 
. : . : . : . : . : . :
JMFS015G06+ GCAGGGGAGAAGAGAATAGATTAGAAAACAAGGTTTTACATTAAAACCAATTACAACATA
JMFS041G11+ GCAGGGGAGAAGAGAATAGATTAGAAAACAAGGTTTTACATTAAAACCAATTACAACATA
rJMFF014I13- ATAGATTAGAAAACAAGGTTTTACATTAAAACCAATTACAACATA
JMFN030M10+ GCAGGGGAGAAGAGAATAGATTAGAAAACAAGGTTTTACATTAAAACCAATTACAACATA
JMFN013P19+ GCAGGGGAGAAGAGAATAGATTAGAAAACAAGGTTTTACATTAAAACCAATTACAACATA
JMFS077F07+ GCAGGGGAGAAGAGAATAGATTAGAAAACAAGGTTTTACATTAAAACCAATTACAACATA
JMSF021I12+ GCAGGGGAGAAGAGAATAGATTAGAAAACAAGGTTTTACATTAAAACCAATTACAACATA
                      ____________________________________________________________
consensus GCAGGGGAGAAGAGAATAGATTAGAAAACAAGGTTTTACATTAAAACCAATTACAACATA
 
. : . : . : . : . : . :
JMFS015G06+ TTACAGACAGAAGCAAAGGTAGGTTTCTTGGTTTCTCACTTGTGGCAAATCTTGGCAGTG
JMFS041G11+ TTACAGACAGAAGCAAAGGTAGGTTTCTTGGTTTCTCACTTGTGGCAAATCTTGGCAGTG
rJMFF014I13- TTACAGACAGAAGCAAAGGTAGGTTTCTTGGTTTCTCACTTGTGGCAAATCTTGGCAGTG
JMFN030M10+ TTACAGACAGAAGCAAAGGTAGGTTTCTTGGTTTCTCACTTGTGGCAAATCTTGGCAGTG
JMFN013P19+ TTACAGACAGAAGCAAAGGTAGGTTTCTTGGTTTCTCACTTGTGGCAAATCTTGGCAGTG
JMFS077F07+ TTACAGACAGAAGCAAAGGTAGGTTTCTTGGTTTCTCACTTGTGGCAAATCTTGGCAGTG
JMSF021I12+ TTACAGACAGAAGCAAAGGTAGGTTTCTTGGTTTCTCACTTGTGGCAAATCTTGGCAGTG
                      ____________________________________________________________
consensus TTACAGACAGAAGCAAAGGTAGGTTTCTTGGTTTCTCACTTGTGGCAAATCTTGGCAGTG
 
. : . : . : . : . : . :
JMFS015G06+ GGCATTGTCACACAGATAGGTCCATACTTCTTCTTGGCCTCCAGAGTCCCTCTCTTCGGC
JMFS041G11+ GGCATTGTCACACAGATAGGTCCATACTTCTTCTTGGCCTCCAGAGTCCCTCTCTTCGGC
rJMFF014I13- GGCATTGTCACACAGATAGGTCCATACTTCTTCTTGGCCTCCAGAGTCCCTCTCTTCGGC
JMFN030M10+ GGCATTGTCACACAGATAGGTCCATACTTCTTCTTGGCCTCCAGAGTCCCTCTCTTCGGC
JMFN013P19+ GGCATTGTCACACAGATAGGTCCATACTTCTTCTTGGCCTCCAGAGTCCCTCTCTTCGGC
JMFS077F07+ GGCATTGTCACACAGATAGGTCCATACTTCTTCTTGGCCTCCAGAGTCCCTCTCTTCGGC
JMSF021I12+ GGCATTGTCACACAGATAGGTCCATACTTCTTCTTGGCCTCCAGAGTCCCTCTCTTCGGC
                      ____________________________________________________________
consensus GGCATTGTCACACAGATAGGTCCATACTTCTTCTTGGCCTCCAGAGTCCCTCTCTTCGGC
 
. : . : . : . : . : . :
JMFS015G06+ TCGTCCGCCATGGCAATCTTGGCGATGGAGCACGCCGCCGCCATGGCAACGCCAAAAACC
JMFS041G11+ TCGTCCGCCATGGCAATCTTGGCGATGGAGCACGCCGCCGCCATGGCAACGCCAAAAACC
rJMFF014I13- TCGTCCGCCATGGCAATCTTGGCGATGGAGCACGCCGCCGCCATGGCAACGCCAAAAACC
JMFN030M10+ TCGTCCGCCATGGCAATCTTGGCGATGGAGCACGCCGCCGCCATGGCAACGCCAAAAACC
JMFN013P19+ TCGTCCGCCATGGCAATCTTGGCGATGGAGCACGCCGCCGCCATGGCAACGCCAAAAACC
JMFS077F07+ TCGTCCGCCATGGCAATCTTGGCGATGGAGCACGCCGCCGCCATGGCAACGCCAAAAACC
JMSF021I12+ TCGTCCGCCATGGCAATCTTGGCGATGGAGCACGCCGCCGCCATGGCAACGCCAAAAACC
                      ____________________________________________________________
consensus TCGTCCGCCATGGCAATCTTGGCGATGGAGCACGCCGCCGCCATGGCAACGCCAAAAACC
 
. : . : . : . : . : . :
JMFS015G06+ AACTCCCTCCTCCCGTTGCTGCTCTCTTCCCCGGTCTTTGCCATGGCGGTTTCGCCCTCA
JMFS041G11+ AACTCCCTCCTCCCGTTGCTGCTCTCTTCCCCGGTCTTTGCCATGGCGGTTTCGCCCTCA
rJMFF014I13- AACTCCCTCCTCCCGTTGCTGCTCTCTTCCCCGGTCTTTGCCATGGCGGTTTCGCCCTCA
JMFN030M10+ AACTCCCTCCTCCCGTTGCTGCTCTCTTCCCCGGTCTTTGCCATGGCGGTTTCGCCCTCA
JMFN019D21+ ACTCCCTCCTCCCGTTGATGCTCTCTTCCCCGGTCTTTGCCATGGCGGTTTCGCCCTCA
JMFN013P19+ AACTCCCTCCTCCCGTTGCTGCTCTCTTCCCCGGTCTTTGCCATGGCGGTTTCGCCCTCA
JMFS077F07+ AACTCCCTCCTCCCGTTGCTGCTCTCTTCCCCGGTCTTTGCCATGGCGGTTTCGCCCTCA
JMSF021I12+ AACTCCCTCCTCCCGTTGCTGCTCTCTTCCCCGGTCTTTGCCATGGCGGTTTCGCCCTCA
                      ____________________________________________________________
consensus AACTCCCTCCTCCCGTTGCTGCTCTCTTCCCCGGTCTTTGCCATGGCGGTTTCGCCCTCA
 
. : . : . : . : . : . :
JMFS015G06+ GACGCCTTCGAGGCCCTGACGGTGAACGCCCCACGGCGGCCGGCGGTGGGAGCCTTGGCG
JMFS041G11+ GACGCCTTCGAGGCCCTGACGGTGAACGCCCCACGGCGGCCGGCGGTGGGAGCCTTGGCG
rJMFF014I13- GACGCCTTCGAGGCCCTGACGGTGAACGCCCCACGGCGGCCGGCGGTGGGAGCCTTGGCG
JMFN030M10+ GACGCCTTCGAGGCCCTGACGGTGAACGCCCCACGGCGGCCGGCGGTGGGAGCCTTGGCG
JMFN019D21+ GACGCGTTGGAGGCCCTGTCGGTGAACGCCCCACGGCGGCCGACGGTGGGAGCCTTGGCG
JMFN013P19+ GACGCCTTCGAGGCCCTGACGGTGAACGCCCCACGGCGGCCGGCGGTGGGAGCCTTGGCG
JMFS077F07+ GACGCCTTCGAGGCCCTGACGGTGAACGCCCCACGGCGGCCGGCGGTGGGAGCCTTGGCG
JMSF021I12+ GACGCCTTCGAGGCCCTGACGGTGAACGCCCCACGGCGGCCGGCGGTGGGAGCCTTGGCG
                      ____________________________________________________________
consensus GACGCCTTCGAGGCCCTGACGGTGAACGCCCCACGGCGGCCGGCGGTGGGAGCCTTGGCG
 
. : . : . : . : . : . :
JMFS015G06+ ACGGCGGGGAGGAATGCAGGTGACACTGTCATGGATGCCA
JMFS041G11+ ACGGCGGGGAGGAATGCAGGTGACACTGTCATGGATGCCATAGCCTCGGAGTTGT
rJMFF014I13- ACGGCGGGGAGGAATGCAGGTGACACTGTCATGGATGCCATAGCCTCGGAGTTGTTCTTG
JMFN030M10+ ACGGCGGGGAGGAATGCAGGTGACACTGTCATGGATGCCATAGCCTCGGAGTTGTTCTTG
JMFN019D21+ TCGGCGGGGAGGAATGCAGGTGGCGCTGTCATGGATGCCATAGCCTCGGAGTTGTTCTTG
JMFN013P19+ ACGGCGGGGAGGAATGCAGGTGACACTGTCATGGATGCCATAGCCTCGGAGTTGTTCTTG
JMFS077F07+ ACGGCGGGGAGGAATGCAGGTGACACTGTCATGGATGCCATAGCCTCGGAGTTGTTCTTG
JMSF021I12+ ACGGCGGGGAGGAATGCAGGTGACACTGTCATGGATGCCATAGCCTCGGAGTTGTTCTTG
                      ____________________________________________________________
consensus ACGGCGGGGAGGAATGCAGGTGACACTGTCATGGATGCCATAGCCTCGGAGTTGTTCTTG
 
. : . : . : . : . : . :
rJMFF014I13- ATCACTCTTGTGTTGTTTGTGTGTTGTG
JMFN030M10+ ATCACTCTTGTGTTGTTTGTGTGTTGTGGAGAAAG
JMFN019D21+ ATCACTCTTGTGTTGTTTGTGTGTTGTGGAGAAAGAG
JMFN013P19+ ATCACTCTTGTGTTGTTTGTGTGTTGTGGAGAAAGAG
JMFS077F07+ ATCACTCTTGTGTTGTTTGTGTGTTGTGGAGAAAGAGTTTGGGGGGAGGGGTGTT
JMSF021I12+ ATCACTCTTGTGTTGTTTGTGTGTTGTGGAGAAAGAGTTTGGGGGGAGGGGTGTTTGGTC
                      ____________________________________________________________
consensus ATCACTCTTGTGTTGTTTGTGTGTTGTGGAGAAAGAGTTTGGGGGGAGGGGTGTTTGGTC