List of clones in pair P006275.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF050O04Sequence666007770 (81)gb|AFU50387.1|1e-98chloroplast ribulose bisphosphate carboxylase/oxygenase activase small isoform 745002684 (24)ref|XP_011082617.1|2e-28PREDICTED: histone H1-like [Sesamum indicum]

Contig 7770 BLAST Hits against nr-aa DB Show

Contig 2684 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig007770============================================1691         ============================================Contig002684============================================1301
 221    --------------------------------------->JMSF050O04                                                                                        <---------------------------------------------------------rJMSF050O04  
                                                               <-----------------------------rJMSF047J23-             
                                                                <----------------------------rJMSF043H17-             
        ----------------------->JMSF009G16*                                                                           
                                                      <--------------------------rJMSF044F12#                         
         --------------------------------->JMFN016H10-                                                                
         ------------------------------------>JMFN032L19-                                                             
                                                                                                                                                                 ----------------------------------------------->JMFN014P13-  
                                                                                                                                                           <----------------------------------------------------------rJMFF024O17* 
                                                                                                                                                          <---------------------------------------------------------rJMSF029H21# 
                                                                                                                                                                        <---------------------------------------------rJMFF045D23* 
                                                                                                                                                         <-----------------------------------------------------------rJMFF012G22* 
                                                                                                                                                        <-----------------------------------------------------------rJMFF023G09* 
                                                                                                                                                              <-------------------------------------------------------rJMFF024F13* 
                                                                                                                                                     --------------------------------------------->JMFN016K09-  
                                                                                                                                                                                        <---------------------------rJMFF014P19* 
                                                                                                                                                                  ----------------------------------------------->JMFN039G03-  
                                                                                                                                                                                <-------------------------------------rJMFF047J10* 
                                                                                                                                                                              <-------------------------------------------rJMFF044F16* 
                                                                                                                                                            <--------------------------------------------------------rJMFF038G15* 
                                                                                                                                                                          <---------------------------------------------rJMFF043E20* 
                                                                                                                                                               <------------------------------------------------------rJMFF032B05* 
                                                                                                                                                            <---------------------------------------------------------rJMFF026I02* 
                                                                                                                                                           <--------------------------------------------------------rJMSF028L16* 
                                                                                                                                                           <--------------------------------------------------------rJMSF027I23* 
                                                                                                                                                           <--------------------------------------------------------rJMSF013I21* 
                                                     <--------------------------------------------rJMFF040F06**
        --------------------------------->JMFF007P06**
                                                       <--------------------------------------------rJMSF042H17**
                                                    <--------------------------------------------rJMSF028D06**
                                                                           <-----------------------------rJMFF046B02**
                                                       <------------------------------------------rJMFF027B21**
                                                  <----------------------------------------------rJMSF014M21**
      ---------------------------------->JMSF023P10**
                                                     <----------------------------------------------rJMSF009B12**
       -------------------------------------->JMSF024I15**
                                                       <--------------------------------------------rJMSF020K08**
                                                      <-----------------------------------------rJMSF045N02**
                                            <----------------------------------------------------rJMSF052G23**
                                                  <----------------------------------------------rJMSF023P10**
                                                       <--------------------------------------------rJMSF015D24**
        ------------------------------>JMFF038H09**
        --------------------------------->JMFF019G05**
                                                     <-------------------------------------------rJMSF024I15**
        -------------------------------->JMFF027B21**
                                                 <----------------------------------------------rJMSF045E20**
        ------------------------------>JMFF046N17**
                                                          <----------------------------------------rJMFF009J24**
                                                               <-----------------------------------rJMFF041N09**
        ----------------------------->JMFF046B02**
         ------------------->JMSF018D04**
                                                      <------------------------------------------rJMSF037L10**
        --------------------------------------------->JMSF042H17**
                                                           <------------------------------------------rJMFF007P06**
       -------------------------------------->JMSF028D06**
                                                     <-------------------------------------------rJMSF002I05**
                                                                      <-------------------------------rJMFF029F19**
                                                     <---------------------------------------------rJMFF006G03**
                                                           <-------------------------------------rJMSF041C15**
                                                                       <---------------------------rJMFF046N17**
        ---------------------------->JMFF029F19**
     ------------------>JMSF007N23**
        --------------------------------->JMFF027M24**
                                                  <----------------------------------------------rJMSF030P15**
        -------------------------------------->JMSF030P15**
        ------------------->JMSF002I05**
        ------------->JMSF009B12**
       -------------------------------------->JMSF037L10**
               ------------------------------------->JMSF045J23**
                                                           <------------------------------------------rJMFF019G05**
        ------------------------------------->JMSF020K08**
        ------------->JMSF012E03**
                                                       <------------------------------------------rJMSF050C24**
        --------------------------------------->JMSF045N02**
                                                           <---------------------------------------rJMFF038H09**
                                                                     <-----------------------------------rJMFF051O04**
        -------------------------------------->JMSF050C24**
                                                      <---------------------------------------------rJMSF012E03**
                                                    <--------------------------------------------rJMSF007N23**
        ----------------------------------->JMSF052G23**
                                                        <--------------------------------------------rJMSF018D04**
                                                          <------------------------------------------rJMFF007E22**
       ---------------------------->JMSF014M21**
       --------------------------------------->JMSF045E20**
                                                                                <------------------rJMSF004B07**
        ------------------->JMSF004G22**
        ----------------------------------->JMFF009J24**
                                                            <----------------------------------------rJMFF027M24**
        -------------------------------------->JMFF041N09**
                                                                                 <------------rJMSF004G22**
                                                      <--------------------------------------------rJMSF045J23**
        --------------------------------------->JMSF041C15**
        ------------->JMSF004B07**
        --------------------------------->JMFF007E22**
                                                                                    --------------->JMSF046N10**
                                               ------------>JMSF015D24**
        --------------------------------->JMFF006G03**
        ---------------------------->JMFF040F06**
                                                                                    <------------rJMSF046N10**
        ------------------------------------>JMFF051O04**
                                                                                                                      --------------------------------------------->JMFF050I12**
                                                                                                                                                     <--------------------------------------------------------------rJMSF046D23**
                                                                                                                      ---------------------------------------------------------->JMSF046D23**
                                                                                                                                                                                <---------------------------------------rJMFF050I12**