clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF017H04 | Sequence | 568 | 005285 (10) | ref|XP_004232479.1| | 5e-76 | PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Solanum lycopersicum] re | 662 | 005285 (10) | ref|XP_004232479.1| | 7e-62 | PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Solanum lycopersicum] re |
JMFN025E20 | Sequence | 611 | 005285 (10) | ref|XP_004232479.1| | 6e-64 | PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Solanum lycopersicum] re | |||||
JMFN035M11 | Sequence | 600 | 005285 (10) | ref|XP_004232479.1| | 2e-75 | PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Solanum lycopersicum] re | |||||
JMFN043C14 | Sequence | 593 | 005285 (10) | ref|XP_004232479.1| | 6e-76 | PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Solanum lycopersicum] re | |||||
JMSF034C15 | Sequence | 656 | 005285 (10) | ref|XP_004232479.1| | 6e-67 | PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Solanum lycopersicum] re | 616 | 005285 (10) | ref|XP_004232479.1| | 4e-67 | PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Solanum lycopersicum] re |
JMSF046O11 | Sequence | 717 | 005285 (10) | ref|XP_004232479.1| | 6e-65 | PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Solanum lycopersicum] re | 547 | 016200 | ref|XP_009621869.1| | 5e-22 | PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Nicotiana tomentosiformi |
JMSF051H06 | Sequence | 636 | 005285 (10) | ref|XP_004232479.1| | 9e-76 | PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Solanum lycopersicum] re | 581 | 005285 (10) | ref|XP_004232479.1| | 5e-76 | PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Solanum lycopersicum] re |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
Contig16200 is a singlet.SCORE============================================Contig005285============================================ 731 ============================================Contig016200============================================ ----------------------------------------------------------------------------->JMFN043C14- <---------------------------------------------------------JMFN035M11- ---------------------------------------------------->JMFN025E20- -------------------------------------------------------------------->JMSF046O11# <------------------------------------------------------------------------------------------rJMFF017H04** ------------------------------------------------------>JMSF051H06** <---------------------------------------------------------------------rJMSF051H06** <------------------------------------------------------rJMSF034C15** ------------------------------------------------------------------->JMFF017H04** ------------------------------------------------------>JMSF034C15**