clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF026M16 | Sequence | 671 | 003705 (3) | ref|XP_009765070.1| | 7e-108 | PREDICTED: transcription initiation factor TFIID subunit 6-like isoform X2 [Nic | 670 | 000235 (181) | ref|XP_004170962.1| | 1e-145 | PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003705============================================ 717 ============================================Contig000235============================================1010 97 --------------------------------------------------------------------------------------------->JMSF026M16 <------------------------------------------------------------------rJMSF026M16 --------------------------------------------------------------------------------------------------->JMSF048D07* --------------------------------------------------------------------------------------->JMFF043N03* ------------------------------------------------------------->JMFS102E07- ------------------------------>JMSF006K24- -------------------------------------------------------------->JMFS115H10- <----------------------------rJMFF037A05* ------------------------------------------------------------>JMFN006D08- ----------------------------------------------------------->JMFN030A02- -------------------------------------------------------->JMSF025H17- ----------------------------------------------------------->JMFS099B07- <----------------------------------------------------------------------------rJMSF007H09* -------------------------------------------------------------->JMFN017L08- <------------------------------------------------------------------------rJMSF031N09* --------------------------------------------->JMSF013M07# ------------------------------------------------------>JMFS043B11- <-------------------------------------------------------JMFN018E22- ------------------------------------------->JMSF008F17- -------------------------------------------------------->JMFS048D04- -------------------------------------------------------------->JMFN006P06- -------------------------------------------------------------->JMFN008G20- <--------------------------------------------------------------------------rJMSF047O05* <-------------------------------------rJMSF006O15* <----------------rJMSF049M20- --------------------------------------------------------->JMFN018P05- -------------------------------------------------------------->JMFS061G02- <--------------------------------rJMFF013M21- ---------------------------------------->JMFN016K18- --------------------------------------------------------->JMFN017P04- <--------------------------------------rJMSF043B16- ------------------------------------------------------------>JMFN014I15- ------------------------------------------------>JMFS158G06- -------------------------->JMSF006O13- ------------------------------------------------------------>JMFN037E19- -------------------------------------------------------------->JMFN005C09- ---------------------------------------------->JMFN012K19- ------------------------------------------------------------>JMFN009D05- -------------------------------------------------------------->JMFN013E02- -------------------->JMSF012C24* <----------------------------------------------------JMFN030N08- <--------------------------------------------------------------------------rJMSF025M18* <----------------------------------------------rJMFF003C24- <----------------------------------------rJMFF030M20- ------------------------------------------------------------->JMFN011L18- ----------------------------------------------------------->JMFS088A03- <---------------------------------------------------------------------------rJMSF021J23* ------------------------------------------------------>JMFS033C02- -------------------------------------------------------------->JMFN010O04- ------------------------------------------------------>JMFS103C08- <--------------------------------------------------------------------rJMFF008N20** <------------------------------------------------------------------rJMFF003I05** ---------------------------------------------->JMFF003I05** ----------------------------------------------------------------->JMSF047K09** <--------------------------------------------------------------------------rJMSF045H15** ---------------------------------->JMSF008L08** <---------------------------------------------------------------rJMSF037N01** --------------------------------------------->JMSF015P15** ----------------------------------------------------------------->JMSF037H11** <-------------------------------------------------------------------------------------rJMSF052G19** --------------------------------------------->JMFF013M10** ----------------------------------->JMSF007C22** ------------------------------------------------------>JMFF032A06** <-----------------------------------------------------------------rJMFF010J11** <------------------------------------------------------------------rJMFF031L08** ------------------------------------------------------------------------------>JMSF046I16** <----------------------------------------------------------------------------rJMSF017O12** <---------------------------------------------------------------------------rJMSF025M22** <--------------------------------------------------------------------------rJMSF013K21** --------------------------------------------------------------->JMSF030P07** <-----------------------------------------------------------------------rJMFF028H08** ------------------------->JMSF013K21** <----------------------------------------------------------------------rJMSF022C13** ----------------------------------------------------------------->JMSF033N19** ----------------------------------------------------------------->JMSF051M12** ---------------------------------------------------------------->JMSF048N05** <---------------------------------------------------------------------------rJMSF037H11** ---------------------------------------------------------------------------->JMSF043J21** ------------------------------------------------------->JMFF010E19** ---------------------------------------------------------------------------->JMSF043N04** <------------------------------------------------------------------------------rJMSF052A14** --------------------------------------------------------------->JMSF034L09** <----------------------------------------------------------------------rJMFF016C15** <------------------------------------------rJMSF049A19** ---------------------------------------------------------------->JMSF049I17** <---------------------------------------------------------------------------rJMSF046I16** --------------------------------------------->JMSF001F06** <----------------------------------------------------------------------------rJMSF013D16** --------------------------------------------------------------->JMSF052G19** <-----------------------------------------------------------------------rJMSF051M12** <---------------------------------------------------------------------------------rJMSF042F09** <----------------------------------------------------------------------rJMSF024I07** <-----------------------------------------------------------------------------rJMSF048E05** <-----------------------------------------------------------------rJMFF028A13** <-----------------------------------------------------------------rJMFF036K09** ----------------------------------------------------------------->JMSF026N16** <---------------------------------------------------------------------------rJMSF052J08** <----------------------------------------------------------------------------rJMSF015N09** <----------------------------------------------------------------------------rJMSF026N16** <--------------------------------------------------------------------------------rJMSF039O08** <-----------------------------------------------------------------rJMSF033N19** -------------------------->JMSF016H19** ------------------------------------------>JMFF010J11** <-------------------------------------------------------------------------rJMSF043N04** <-------------------------------------------------------------------------rJMSF026O13** -------------------------------------------->JMSF002F06** <-------------------------------------------------------------------------rJMFF032A06** <------------------------------------------------------------------------------------rJMSF039D13** -------------------------------------------------------------->JMSF026O13** -------------------------------------------->JMSF017O12** <--------------------------------------------------------------------rJMSF019J06** ---------------------------------------------->JMSF016I18** <------------------------------------------------------------------------rJMSF008L08** ------------------------------------------------------>JMFF016M24** <----------------------------------------------------------------------rJMSF011M21** ----------------------------------------------------------->JMSF040P20** <--------------------------------------------------------------------------rJMSF002N06** ---------------------------------------------->JMFF028A13** <----------------------------------------------------------------------------rJMSF041K21** ----------------------------------------------------------->JMSF019J06** ----------------------------------------------------------------->JMSF038E23** <-----------------------------------------------------------------------rJMSF002F06** ----------------------------------------------------------------->JMSF022D03** ----------------------------------------------------------------->JMSF048E05** -------------------------------------------->JMSF015N09** ------------------------------------------------------>JMFF008N20** --------------------------------------------------------------------------->JMSF041K21** <------------------------------------------------------------------------------rJMSF016H19** <------------------------------------------------rJMFF042F03** ---------------------------------------------------------------------->JMSF042F09** --------------------------------------------------------------->JMSF049A19** <---------------------------------------------------------------rJMFF025H07** <----------------------------------------------------------------------------rJMSF022D03** <---------------------------------------------------------------------------rJMSF047K09** --------------------------------------------------------------->JMSF026L18** <----------------------------------------------------------------------rJMSF043J21** ---------------------------------------------->JMFF025H07** --------------------------------------------------------------->JMSF052A14** <------------------------------------------------------------------------------rJMFF025F24** <----------------------------------------------------------------------------------rJMSF040P20** --------------------------------------------------------------->JMFF042F03** -------------------------------------------------------------------->JMSF045H15** ------------------------------------------->JMSF006H09** ------------------------------------>JMSF002N06** ---------------------------------------------------------------->JMSF039D13** <----------------------------------------------------------------------rJMSF048N05** <---------------------------------------------------------------------rJMSF034L09** --------------------------------------------------------------->JMSF025M22** <----------------------------------------------------------------------------rJMSF019G18** <------------------------------------------------------------------------rJMFF016M24** <----------------------------------------------------------------------------rJMSF001F06** <-------------------------------------------------------------------------rJMSF030P07** <----------------------------------------------------------------------------------------rJMSF039H13** <---------------------------------------------------------rJMSF006H09** --------------------------------------------->JMFF031L08** ------------------------>JMSF011M21** <------------------------------------------------------------rJMSF033N23** <---------------------------------------------------------------------------rJMSF007C22** <-------------------------------------------------------------------------------rJMSF018D15** --------------------------------------------------------------->JMSF052J08** <---------------------------------------------------------------rJMFF022B14** ------------------------------------------------------>JMFF028H08** <-----------------------------------------------------------------------rJMFF010E19** --------------------------------------------------------------->JMSF037N01** <----------------------------------------------------------------------rJMFF013M10** <--------------------------------------------------------------------------rJMSF049I17** --------------------------------------------------------------->JMSF024I07** --------------------------------------------------------------->JMSF039O08** ------------------------------------------------------->JMFF036K09** <-------------------------------------------------------------------------------------rJMSF038E23** --------------------------------------------->JMSF018D15** --------------------------------------------------------------->JMSF033N23** ----------------------------------------------------->JMFF022B14** <----------------------------------------------------------------------rJMSF047K06** ----------------------------------------------->JMFF016C15** --------------------------------------------------------------->JMSF039H13** ----------------------------------------------------------------->JMSF047K06** -------------------------------------------->JMSF019G18** ------------------------------------------------------->JMFF025F24** <----------------------------------------------------------------------------rJMSF026L18** <----------------------------------------------------------------------------rJMSF015P15** <----------------------------------------------------------------------------rJMSF016I18** -------------------------------------------->JMSF013D16** -------------------------------------------------------------->JMSF022C13**