List of clones in pair P005640.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038K07Sequence479010249 (5)gb|KJB37591.1|2e-16hypothetical protein B456_006G212500 [Gossypium raimondii]903006385 (80)ref|XP_009114489.1|1e-131PREDICTED: polyubiquitin-like [Brassica rapa]

Contig 10249 BLAST Hits against nr-aa DB Show

Contig 6385 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig010249============================================ 530         ============================================Contig006385============================================1253
 124  ------------------------------------------------------------------------>JMFF038K07                                                         <-------------------------------------------------------------rJMFF038K07  
     --------------------------------------------------------------------------->JMFF030B07-                          
                 --------------------------------------------------------------------------------------->JMFF012F20-  
                                            ----------------------------------------------------->JMFF020B10#         
                                            ------------------------------------------------------------>JMFF020B06-  
                                                                                                                                             -------------------------------------------------->JMFN032P06-  
                                                                                                                        ------------------------------------------------>JMFS092F03-  
                                                                                                                                                                                             --------------------->JMFS133F02-  
                                                                                                                                           <--------------------------------------------------------------------rJMFF003K01- 
                                                                                                                                                    <-------------------------------------------------------------------rJMFF038M12* 
                                                                                                                                                    -------------------------------------------------->JMFN003L23-  
                                                                                                                                                     -------------------------------------------------->JMFN005M07-  
                                                                                                                                                               -------------------------->JMFS046F03-  
                                                                                                                      ------------------------------------------------------->JMFF028K01-  
                                                                                                                      ----------------->JMSF005P16*  
                                                                                                                        ------------------------------------------------>JMFN012O04-  
                                                                                                                                                      <---------------------------------------------------------rJMFF009G20- 
                                                                                                                                                       <-------------------------------------------------------------rJMFF013J04- 
                                                                                                                                                   <-----------------------------------------------------------------rJMFF002F16**
                                                                                                                       ----------------------------------------------------->JMFF033E08**
                                                                                                                      ----------------------------------------------------------->JMFF009B16**
                                                                                                                                           <----------------------------------------------------------------------rJMFF033G20**
                                                                                                                                             <-----------------------------------------------------------------------rJMFF013I06**
                                                                                                                                           <---------------------------------------------------------------------rJMFF033E08**
                                                                                                                      --------------------------------------------------------->JMFF002D04**
                                                                                                                                              <------------------------------------------------------------------rJMFF022O21**
                                                                                                                       ------------------------------------------------------------>JMFF004O05**
                                                                                                                                                    <-------------------------------------------------------------rJMFF009B16**
                                                                                                                                                     <----------------------------------------------------------rJMFF012M06**
                                                                                                                       --------------------------------------------------------->JMFF012M06**
                                                                                                                      ------------------------------------------->JMFF050N18**
                                                                                                                                          <----------------------------------------------------------------------rJMFF009M19**
                                                                                                                       ----------------------------------------------->JMFF030K16**
                                                                                                                                                                                                               <--------rJMFF014G10**
                                                                                                                                                                 <-----------------------------------------------rJMFF030K16**
                                                                                                                       ----------------------------------------------------------->JMFF018D01**
                                                                                                                                                    <------------------------------------------------------------------rJMFF031L09**
                                                                                                                      ---------------------------------------------------------->JMFF026H09**
                                                                                                                      ----------->JMFF048O20**
                                                                                                                      ----------------------------------------------------------->JMFF013I06**
                                                                                                                                              <-----------------------------------------------------------------rJMFF036A22**
                                                                                                                                          <----------------------------------------------------------------------rJMFF010N12**
                                                                                                                                                                                                      <------------rJMSF036G11**
                                                                                                                      -------------------------------------------------------->JMFF036P16**
                                                                                                                      --------------------------------------------------------->JMFF016O09**
                                                                                                                       ------------------------------------------------->JMFF036A22**
                                                                                                                      ---------------------------------------------------->JMFF045O22**
                                                                                                                      ------------------------------------------------------------->JMFF031L09**
                                                                                                                                                   <------------------------------------------------------------------rJMFF001O16**
                                                                                                                      ---------------------------------------------------------->JMFF009M19**
                                                                                                                                                      <-----------------------------------------------------------------rJMFF036P16**
                                                                                                                       ----------------------------------------------------------->JMFF038H23**
                                                                                                                                                   <-------------------------------------------------------------rJMFF018D01**
                                                                                                                                                                                                               ---------->JMFF014G10**
                                                                                                                                                                                     <---------------------------rJMFF048O19**
                                                                                                                      ---------------------------------------------------->JMFF002F16**
                                                                                                                      ------------------------------------------------------------->JMFF001D21**
                                                                                                                      ------------------------------------------------------->JMFF012I01**
                                                                                                                                                                    <----------------------------------------------rJMFF045O22**
                                                                                                                      ----------------------------------------->JMFF048O19**
                                                                                                                                                             <---------------------------------------------------rJMFF021C20**
                                                                                                                      ---------------------------------------------------->JMFF039G24**
                                                                                                                                                 <----------------------------------------------------------------------rJMFF016O09**
                                                                                                                                                                                  <-------------------------------------rJMFF050N18**
                                                                                                                                                  <--------------------------------------------------------------------rJMFF004O05**
                                                                                                                                                   <--------------------------------------------------------------------rJMFF012I01**
                                                                                                                      ---------------------------------------------------------->JMFF028F09**
                                                                                                                                                                                       <--------------------------rJMFF048O20**
                                                                                                                       ---------------------------------------------------->JMFF021C20**
                                                                                                                                                       <--------------------------------------------------------rJMFF007N04**
                                                                                                                                              <----------------------------------------------------------------rJMSF022H17**
                                                                                                                                                 <---------------------------------------------------------------rJMFF038H23**
                                                                                                                      ---------------------------------------------------->JMFF001O16**
                                                                                                                                                 <----------------------------------------------------------------------rJMFF001D21**
                                                                                                                                                                                                      --------------->JMSF036G11**
                                                                                                                                          <---------------------------------------------------------------------rJMFF028F09**
                                                                                                                                             <------------------------------------------------------------------rJMFF026H09**
                                                                                                                      ------------------------------------------------>JMFF007N04**
                                                                                                                       --------------------------------------------------------->JMFF010N12**
                                                                                                                       ---------------------------------------------------------->JMFF033G20**
                                                                                                                                                            <-----------------------------------------------------------rJMFF039G24**
                                                                                                                                                  <---------------------------------------------------------------------rJMFF002D04**
                                                                                                                       ----------------------------->JMFF022O21**
                                                                                                                      --------------------------------------------------------->JMSF022H17**