| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF022A23 | Sequence | 521 | 001669 (7) | ref|XP_007044696.1| | 5e-42 | RNA polymerases N / 8 kDa subunit [Theobroma cacao] gb|EOY00528.1| RNA polymeras | 477 | 001669 (7) | ref|XP_007044696.1| | 3e-42 | RNA polymerases N / 8 kDa subunit [Theobroma cacao] gb|EOY00528.1| RNA polymeras |
| JMFF040B15 | Sequence | 521 | 001669 (7) | ref|XP_007044696.1| | 5e-42 | RNA polymerases N / 8 kDa subunit [Theobroma cacao] gb|EOY00528.1| RNA polymeras | 474 | 001669 (7) | ref|XP_007044696.1| | 3e-42 | RNA polymerases N / 8 kDa subunit [Theobroma cacao] gb|EOY00528.1| RNA polymeras |
| JMSF009F23 | Sequence | 374 | 015679 | gb|ABY85198.2| | 6e-60 | mitogen activated protein kinase 1 [Datura metel] | 131 | 001669 (7) | ref|XP_007044696.1| | 9e-09 | RNA polymerases N / 8 kDa subunit [Theobroma cacao] gb|EOY00528.1| RNA polymeras |
| JMSF047P07 | Sequence | 502 | 001669 (7) | ref|XP_007044696.1| | 3e-42 | RNA polymerases N / 8 kDa subunit [Theobroma cacao] gb|EOY00528.1| RNA polymeras | 448 | 001669 (7) | ref|XP_007044696.1| | 2e-42 | RNA polymerases N / 8 kDa subunit [Theobroma cacao] gb|EOY00528.1| RNA polymeras |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig001669============================================ 521 45 --------------------------------------------------------------------------------------------------->JMFF022A23 <-------------------------------------------------------------------------------------------rJMFF022A23 48 --------------------------------------------------------------------------------------------------->JMFF040B15 <------------------------------------------------------------------------------------------rJMFF040B15 75 ----------------------------------------------------------------------------------------------->JMSF047P07 <-------------------------------------------------------------------------------------rJMSF047P07
The following clones don't have the opposite end in this pair.
<-----------------------rJMSF009F23#