clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMCP004D12 | Sequence | 446 | 012857 (14) | ref|XP_002519752.1| | 1e-70 | 60S ribosomal protein L32, putative [Ricinus communis] gb|EEF42725.1| 60S riboso | |||||
JMCP006B02 | Sequence | 451 | 012857 (14) | ref|XP_002519752.1| | 1e-70 | 60S ribosomal protein L32, putative [Ricinus communis] gb|EEF42725.1| 60S riboso | |||||
JMCP020H06 | Sequence | 284 | 012857 (14) | ref|XP_002519752.1| | 2e-62 | 60S ribosomal protein L32, putative [Ricinus communis] gb|EEF42725.1| 60S riboso | |||||
JMFF001J20 | Sequence | 598 | 012857 (14) | ref|XP_002519752.1| | 4e-77 | 60S ribosomal protein L32, putative [Ricinus communis] gb|EEF42725.1| 60S riboso | 567 | 012857 (14) | ref|XP_002519752.1| | 3e-77 | 60S ribosomal protein L32, putative [Ricinus communis] gb|EEF42725.1| 60S riboso |
JMFF007K18 | Sequence | 642 | 001642 (5) | ref|XP_006339589.1| | 3e-47 | PREDICTED: uncharacterized protein LOC102600197 isoform X1 [Solanum tuberosum] | 738 | 001642 (5) | ref|XP_006339589.1| | 4e-65 | PREDICTED: uncharacterized protein LOC102600197 isoform X1 [Solanum tuberosum] |
JMFF014O23 | Sequence | 456 | 012857 (14) | ref|XP_002519752.1| | 1e-74 | 60S ribosomal protein L32, putative [Ricinus communis] gb|EEF42725.1| 60S riboso | 773 | 012857 (14) | ref|XP_002519752.1| | 8e-67 | 60S ribosomal protein L32, putative [Ricinus communis] gb|EEF42725.1| 60S riboso |
JMFF017C09 | Sequence | 567 | 001642 (5) | ref|XP_006339589.1| | 8e-45 | PREDICTED: uncharacterized protein LOC102600197 isoform X1 [Solanum tuberosum] | 809 | 001642 (5) | ref|XP_006339589.1| | 2e-67 | PREDICTED: uncharacterized protein LOC102600197 isoform X1 [Solanum tuberosum] |
JMFF019J19 | Sequence | 559 | 012857 (14) | ref|XP_002519752.1| | 2e-77 | 60S ribosomal protein L32, putative [Ricinus communis] gb|EEF42725.1| 60S riboso | 634 | 012857 (14) | ref|XP_002519752.1| | 5e-77 | 60S ribosomal protein L32, putative [Ricinus communis] gb|EEF42725.1| 60S riboso |
JMFF033K13 | Sequence | 595 | 012857 (14) | ref|XP_002519752.1| | 4e-77 | 60S ribosomal protein L32, putative [Ricinus communis] gb|EEF42725.1| 60S riboso | 709 | 012857 (14) | ref|XP_002519752.1| | 1e-76 | 60S ribosomal protein L32, putative [Ricinus communis] gb|EEF42725.1| 60S riboso |
JMSF025M08 | Sequence | 628 | 012857 (14) | ref|XP_002519752.1| | 8e-77 | 60S ribosomal protein L32, putative [Ricinus communis] gb|EEF42725.1| 60S riboso | 587 | 012857 (14) | ref|XP_002519752.1| | 5e-77 | 60S ribosomal protein L32, putative [Ricinus communis] gb|EEF42725.1| 60S riboso |
JMSF049J12 | Sequence | 653 | 001642 (5) | ref|XP_006339589.1| | 2e-48 | PREDICTED: uncharacterized protein LOC102600197 isoform X1 [Solanum tuberosum] | 583 | 012857 (14) | ref|XP_010095157.1| | 1e-77 | 60S ribosomal protein L32-1 [Morus notabilis] gb|EXB58323.1| 60S ribosomal prote |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001642============================================1161 ============================================Contig012857============================================ 760 332 ------------------------------------------------------->JMSF049J12 <----------------------------------------------------rJMSF049J12 ---------------------------------------------------------->rJMCP004D12- ------------------------------------->JMCP020H06- ---------------------------------------------------------->rJMCP006B02- <--------------------------------------------------------------rJMFF007K18** ------------------------------------------------>JMFF017C09** <---------------------------------------------------------------------rJMFF017C09** ----------------------------------->JMFF007K18** ----------------------------------------------------------->JMFF014O23** ---------------------------------------------------------------------------------->JMSF025M08** <-------------------------------------------------------------------------rJMFF001J20** <---------------------------------------------------------------------------------------------rJMFF033K13** ------------------------------------------------------------------------------>JMFF033K13** ------------------------------------------------------------------------->JMFF019J19** <----------------------------------------------------------------------------rJMSF025M08** <----------------------------------------------------------------------------------rJMFF019J19** <-----------------------------------------------------------------------------------------rJMFF014O23** ----------------------------------------------------------------------------->JMFF001J20**