| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007K18 | Sequence | 642 | 001642 (5) | ref|XP_006339589.1| | 3e-47 | PREDICTED: uncharacterized protein LOC102600197 isoform X1 [Solanum tuberosum] | 738 | 001642 (5) | ref|XP_006339589.1| | 4e-65 | PREDICTED: uncharacterized protein LOC102600197 isoform X1 [Solanum tuberosum] |
| JMFF017C09 | Sequence | 567 | 001642 (5) | ref|XP_006339589.1| | 8e-45 | PREDICTED: uncharacterized protein LOC102600197 isoform X1 [Solanum tuberosum] | 809 | 001642 (5) | ref|XP_006339589.1| | 2e-67 | PREDICTED: uncharacterized protein LOC102600197 isoform X1 [Solanum tuberosum] |
| JMSF049J12 | Sequence | 653 | 001642 (5) | ref|XP_006339589.1| | 2e-48 | PREDICTED: uncharacterized protein LOC102600197 isoform X1 [Solanum tuberosum] | 583 | 012857 (14) | ref|XP_010095157.1| | 1e-77 | 60S ribosomal protein L32-1 [Morus notabilis] gb|EXB58323.1| 60S ribosomal prote |
This contig is upended
. : . : . : . : . : . :
rJMFF007K18- TGATTGTAGAGTAATATCA
rJMFF017C09- TATGATTGTAGAGTAATATCA
____________________________________________________________
consensus TATGATTGTAGAGTAATATCA
. : . : . : . : . : . :
rJMFF007K18- AGGCAAGTATTTACAGGAGTTGTCTACTCATTAGAAGTAGAACATAAATTAGAGCCACTC
rJMFF017C09- AGGCAAGTATTTACAGGAGTTGTCTACTCATTAGAAGTAGAACATAAATTAGAGCCACTC
____________________________________________________________
consensus AGGCAAGTATTTACAGGAGTTGTCTACTCATTAGAAGTAGAACATAAATTAGAGCCACTC
. : . : . : . : . : . :
rJMFF007K18- AAACAAACTTGCACATCACATTCACTTCCCTGCCTTGGCTGCTCTAGCCCTCCTGCCTTT
rJMFF017C09- AAACAAACTTGCACATCACATTCACTTCCCTGCCTTGGCTGCTCTAGCCCTCCTGCCTTT
____________________________________________________________
consensus AAACAAACTTGCACATCACATTCACTTCCCTGCCTTGGCTGCTCTAGCCCTCCTGCCTTT
. : . : . : . : . : . :
rJMFF007K18- AATGTTGTGATGAAGTGCTGCTCCCTTTGAGGAAGGAACCCCTGCGGTCACCGCCAACAA
rJMFF017C09- AATGTTGTGATGAAGTGCTGCTCCCTTTGAGGAAGGAACCCCTGCGGTCACCGCCAACAA
____________________________________________________________
consensus AATGTTGTGATGAAGTGCTGCTCCCTTTGAGGAAGGAACCCCTGCGGTCACCGCCAACAA
. : . : . : . : . : . :
rJMFF007K18- TAATGTCTTTAAGTCGCGACAAGGGACCAAGCATCCTGCCAATCCTCTCATCATGGAGCC
rJMFF017C09- TAATGTCTTTAAGTCGCGACAAGGGACCAAGCATCCTGCCAATCCTCTCATCATGGAGCC
____________________________________________________________
consensus TAATGTCTTTAAGTCGCGACAAGGGACCAAGCATCCTGCCAATCCTCTCATCATGGAGCC
. : . : . : . : . : . :
rJMFF007K18- CATGCTGCCACTTCAGTTGCAAGATTTGCCACCTCTCGTGTTGCCACCGCTGACCAAGAA
rJMFF017C09- CATGCTGCCACTTCAGTTGCAAGATTTGCCACCTCTCGTGTTGCCACCGCTGACCAAGAA
____________________________________________________________
consensus CATGCTGCCACTTCAGTTGCAAGATTTGCCACCTCTCGTGTTGCCACCGCTGACCAAGAA
. : . : . : . : . : . :
rJMFF007K18- TCACAAGTCCCATTACAGCAGCAGCAACAAAGATTGACCAAAATGTATTTGCCTCTTTAG
rJMFF017C09- TCACAAGTCCCATTACAGCAGCAGCAACAAAGATTGACCAAAATGTATTTGCCTCTTTAG
____________________________________________________________
consensus TCACAAGTCCCATTACAGCAGCAGCAACAAAGATTGACCAAAATGTATTTGCCTCTTTAG
. : . : . : . : . : . :
rJMFF007K18- CATGTGCAACAAGAGAGGCAGCTTGCCTTTTCCACCAAGCTTGACAAGGAAGGTTATCAT
rJMFF017C09- CATGTGCAACAAGAGAGGCAGCTTGCCTTTTCCACCAAGCTTGACAAGGAAGGTTATCAT
____________________________________________________________
consensus CATGTGCAACAAGAGAGGCAGCTTGCCTTTTCCACCAAGCTTGACAAGGAAGGTTATCAT
. : . : . : . : . : . :
rJMFF007K18- CACGCTTATTCTTATTTGAGACACCTGAATTTGATCCTTGCTCAAAAGGTTCTAATGGAC
rJMFF017C09- CACGCTTATTCTTATTTGAGACACCTGAATTTGATCCTTGCTCAAAAGGTTCTAATGGAC
JMFF007K18+ GCTCAAAAGGTTNTAATGGAC
JMSF049J12+ TGATCCTTGCTCAAAAGGTTCTAATGGAC
____________________________________________________________
consensus CACGCTTATTCTTATTTGAGACACCTGAATTTGATCCTTGCTCAAAAGGTTCTAATGGAC
. : . : . : . : . : . :
rJMFF007K18- AATTACTTGCAATGTTTTCCTCAACAATGGTTGATCCAGCCATGTGTTCTTCACTATGCA
rJMFF017C09- AATTACTTGCAATGTTTTCCTCAACAATGGTTGATCCAGCCATGTGTTCTTCACTATGCA
JMFF007K18+ AATTACTTGCAATGTTTTCCTCAACAATGGTTGATCCAGCCATGTGTTCTTCACTATGCA
JMSF049J12+ AATTACTTGCAATGTTTTCCTCAACAATGGTTGATCCAGCCATGTGTTCTTCACTATGCA
____________________________________________________________
consensus AATTACTTGCAATGTTTTCCTCAACAATGGTTGATCCAGCCATGTGTTCTTCACTATGCA
. : . : . : . : . : . :
rJMFF007K18- AGGAACTAGGCATTGCAGTGCTGTGTTTAATTGATTCTTTTGCTGCTGTATCTTCTTTGA
rJMFF017C09- AGGAACTAGGCATTGCAGTGCTGTGTTTAATTGATTCTTTTGCTGCTGTATCTTCTTTGA
JMFF007K18+ AGGAACTAGGCATTGCAGTGCTGTGTTTAATTGATTCTTTTGCTGCTGTATCTTCTTTGA
JMSF049J12+ AGGAACTAGGCATTGCAGTGCTGTGTTTAATTGATTCTTTTGCTGCTGTATCTTCTTTGA
JMFF017C09+ ATTCTTTTGCTGCTGTATCTTCTTTGA
____________________________________________________________
consensus AGGAACTAGGCATTGCAGTGCTGTGTTTAATTGATTCTTTTGCTGCTGTATCTTCTTTGA
. : . : . : . : . : . :
rJMFF007K18- ACTCCGCATCACTAATGGGTAAGATGTTTCCATTTTCATCAAAGATCTGAATCCCANGAA
rJMFF017C09- ACTCCGCATCACTAATGGGTAAGATGTTTCCATTTTCATCAAAGATCTGAATCCCAGGAA
JMFF007K18+ ACTCCGCATCACTAATGGGTAAGATGTTTCCATTTTCATCAAAGATCTGAATCCCAGGAA
JMSF049J12+ ACTCCGCATCACTAATGGGTAAGATGTTTCCATTTTCATCAAAGATCTGAATCCCAGGAA
JMFF017C09+ ACTCCGCATCACTAATGGGTAAGATGTTTCCATTTTCATCAAAGATCTGAATCCCAGGAA
____________________________________________________________
consensus ACTCCGCATCACTAATGGGTAAGATGTTTCCATTTTCATCAAAGATCTGAATCCCAGGAA
. : . : . : . : . : . :
rJMFF007K18- ATGCTGACGAGCCAAATCCTTTAACGTTCATATTCTCTTCAAACTTCATACCTG
rJMFF017C09- ATGCTGACGAGCCAAATCCTTTAACGTTCATATTCTCTTCAAACTTCATACCTGCTGTAC
JMFF007K18+ ATGCTGACGAGCCAAATCCTTTAACGTTCATATTCTCTTCAAACTTCATACCTGCTGTAC
JMSF049J12+ ATGCTGACGAGCCAAATCCTTTAACGTTCATATTCTCTTCAAACTTCATACCTGCTGTAC
JMFF017C09+ ATGCTGACGAGCCAAATCCTTTAACGTTCATATTCTCTTCAAACTTCATACCTGCTGTAC
____________________________________________________________
consensus ATGCTGACGAGCCAAATCCTTTAACGTTCATATTCTCTTCAAACTTCATACCTGCTGTAC
. : . : . : . : . : . :
rJMFF017C09- GGTCTCCCTCAGTTACNAATTTCTCATTTTTAACAACCTGTTCAGTCTGGATCTGATTGN
JMFF007K18+ GGTCTCCCTCAGTTACAAATTTCTCATTTTTAACAACCTGTTCAGTCTGGATCTGATTGT
JMSF049J12+ GGTCTCCCTCAGTTACAAATTTCTCATTTTTAACAACCTGTTCAGTCTGGATCTGATTGT
JMFF017C09+ GGTCTCCCTCAGTTACAAATTTCTCATTTTTAACAACCTGTTCAGTCTGGATCTGATTGT
____________________________________________________________
consensus GGTCTCCCTCAGTTACAAATTTCTCATTTTTAACAACCTGTTCAGTCTGGATCTGATTGT
. : . : . : . : . : . :
rJMFF017C09- TCTCTGGT
JMFF007K18+ TCTCTGGTTCCAATGGCAAATTTTCATGCTGACTTGGTGGAAAGACAAAGTGACCAGACA
JMSF049J12+ TCTCTGGTTCCAATGGCAAATTTTCATGCTGACTTGGTGGAAAGACAAAGTGACCAGACA
JMFF017C09+ TCTCTGGTTCCAATGGCAAATTTTCATGCTGACTTGGTGGAAAGACAAAGTGACCAGACA
____________________________________________________________
consensus TCTCTGGTTCCAATGGCAAATTTTCATGCTGACTTGGTGGAAAGACAAAGTGACCAGACA
. : . : . : . : . : . :
JMFF007K18+ TAAACATGGCATCAGAAGTTTCAGCTTCATACT
JMSF049J12+ TAAACATGGCATCAGAAGTTTCAGCTTCATACTCTGCACTACTCTTATGCTCGTCATTCA
JMFF017C09+ TAAACATGGCATCAGAAGTTTCAGCTTCATACTCTGCACTACTCTTATGCTCGTCATTCA
____________________________________________________________
consensus TAAACATGGCATCAGAAGTTTCAGCTTCATACTCTGCACTACTCTTATGCTCGTCATTCA
. : . : . : . : . : . :
JMSF049J12+ AATCAGCCTGTTTACCAGGAGCAGCAGCATATGCTGATGCTGTAAGGGATACAACCTCCC
JMFF017C09+ AATCAGCCTGTTTACCAGGAGCAGCAGCATATGCTGATGCTGTAAGGGATACAACCTCCC
____________________________________________________________
consensus AATCAGCCTGTTTACCAGGAGCAGCAGCATATGCTGATGCTGTAAGGGATACAACCTCCC
. : . : . : . : . : . :
JMSF049J12+ ACTCATTTCCACGAGGAGCTGTCTCTTCGACCTCCTCATTACTTGCCATTGAGAGAAAAT
JMFF017C09+ ACTCATTTCCACGAGGAGCTGTCTCTTCGACCTCCTCATTACTTGCCATTGAGAGAAAAT
____________________________________________________________
consensus ACTCATTTCCACGAGGAGCTGTCTCTTCGACCTCCTCATTACTTGCCATTGAGAGAAAAT
. : . : . : . : . : . :
JMSF049J12+ TTGAGTTTCACAGCCAGAAGAGAAAGCAGAGAGATCACGGCGATAACCAGAGCTCCGGTG
JMFF017C09+ TTGAGTTTCACAGCCAGAAGAGAAAGCAGAGAGATCACGGCGATAACCAGAGCTCCGGTG
____________________________________________________________
consensus TTGAGTTTCACAGCCAGAAGAGAAAGCAGAGAGATCACGGCGATAACCAGAGCTCCGGTG
. : . : . : . : . : . :
JMSF049J12+ AGAACGATCGGAAAAAGAGAG
JMFF017C09+ AGAACGATCGGAAAAAGAGAGATACGAGGAGAGAGAGAGAGAGAATTTTATAATTGAGCC
____________________________________________________________
consensus AGAACGATCGGAAAAAGAGAGATACGAGGAGAGAGAGAGAGAGAATTTTATAATTGAGCC