List of clones in pair P005109.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007G22Sequence494009283 (27)ref|XP_004247994.1|1e-90PREDICTED: eukaryotic translation initiation factor 3 subunit H [Solanum lycope785009283 (27)ref|XP_002266909.1|2e-110PREDICTED: eukaryotic translation initiation factor 3 subunit H [Vitis vinifera
JMFF013J13Sequence547009283 (27)ref|XP_004247994.1|4e-84PREDICTED: eukaryotic translation initiation factor 3 subunit H [Solanum lycope635009283 (27)ref|XP_009615117.1|3e-86PREDICTED: eukaryotic translation initiation factor 3 subunit H {ECO:0000255|HA
JMFF018N16Sequence617009283 (27)ref|XP_004247994.1|9e-104PREDICTED: eukaryotic translation initiation factor 3 subunit H [Solanum lycope814009283 (27)ref|XP_002266909.1|2e-117PREDICTED: eukaryotic translation initiation factor 3 subunit H [Vitis vinifera
JMFF022E24Sequence140009283 (27)716009283 (27)ref|XP_009615118.1|1e-94PREDICTED: eukaryotic translation initiation factor 3 subunit H {ECO:0000255|HA
JMFF023J23Sequence492009283 (27)ref|XP_004247994.1|3e-73PREDICTED: eukaryotic translation initiation factor 3 subunit H [Solanum lycope716009283 (27)ref|XP_009615117.1|5e-94PREDICTED: eukaryotic translation initiation factor 3 subunit H {ECO:0000255|HA
JMFF038H14Sequence504009283 (27)ref|XP_004247994.1|6e-75PREDICTED: eukaryotic translation initiation factor 3 subunit H [Solanum lycope556009283 (27)ref|XP_011073821.1|8e-58PREDICTED: eukaryotic translation initiation factor 3 subunit H [Sesamum indicu
JMFF044I18Sequence644009283 (27)ref|XP_004247994.1|1e-109PREDICTED: eukaryotic translation initiation factor 3 subunit H [Solanum lycope418009283 (27)ref|XP_010929807.1|2e-40PREDICTED: eukaryotic translation initiation factor 3 subunit H [Elaeis guineen
JMFF045N09Sequence644009283 (27)ref|XP_004247994.1|4e-111PREDICTED: eukaryotic translation initiation factor 3 subunit H [Solanum lycope477009283 (27)ref|XP_010929807.1|2e-42PREDICTED: eukaryotic translation initiation factor 3 subunit H [Elaeis guineen
JMFN008A13Sequence598009283 (27)ref|XP_004247994.1|3e-100PREDICTED: eukaryotic translation initiation factor 3 subunit H [Solanum lycope
JMFS134D10Sequence616009283 (27)ref|XP_004247994.1|1e-119PREDICTED: eukaryotic translation initiation factor 3 subunit H [Solanum lycope
JMSF009E12Sequence346008052 (2)ref|XP_010443524.1|3e-19PREDICTED: glucan endo-1,3-beta-glucosidase 6-like [Camelina sativa]
JMSF015I13Sequence475009283 (27)ref|XP_007034090.1|1e-51Eukaryotic translation initiation factor 3 subunit H isoform 3, partial [Theobr786009283 (27)ref|XP_002266909.1|5e-116PREDICTED: eukaryotic translation initiation factor 3 subunit H [Vitis vinifera
JMSF018P15Sequence484009283 (27)ref|XP_004247994.1|9e-70PREDICTED: eukaryotic translation initiation factor 3 subunit H [Solanum lycope772009283 (27)ref|XP_009615117.1|6e-110PREDICTED: eukaryotic translation initiation factor 3 subunit H {ECO:0000255|HA
JMSF019A18Sequence237009283 (27)ref|XP_009765959.1|1e-17PREDICTED: eukaryotic translation initiation factor 3 subunit H isoform X1 [Nic761009283 (27)ref|XP_002266909.1|1e-114PREDICTED: eukaryotic translation initiation factor 3 subunit H [Vitis vinifera
JMSF033M21Sequence616009283 (27)ref|XP_004247994.1|1e-104PREDICTED: eukaryotic translation initiation factor 3 subunit H [Solanum lycope630009283 (27)ref|XP_009615118.1|2e-100PREDICTED: eukaryotic translation initiation factor 3 subunit H {ECO:0000255|HA
JMSF046B23Sequence529008052 (2)emb|CDY43882.1|2e-49BnaC09g33610D [Brassica napus]702009283 (27)ref|XP_009615117.1|8e-84PREDICTED: eukaryotic translation initiation factor 3 subunit H {ECO:0000255|HA

Contig 8052 BLAST Hits against nr-aa DB Show

Contig 9283 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig008052============================================ 529         ============================================Contig009283============================================1389
  35 --------------------------------------------------------------------------------------------------->JMSF046B23                                                  <--------------------------------------------------rJMSF046B23  
        ---------------------------------------------------------------->JMSF009E12-                                  
                                                                                                                           -------------------------------------------->JMFS134D10-  
                                                                                                                        ------------------------------------------>JMFN008A13-  
                                                                                                                                                                               <---------------------------------------rJMFF038H14**
                                                                                                                          ------------------->JMSF015I13**
                                                                                                                                                                <-------------------------------------------------------rJMSF015I13**
                                                                                                                       ---------------------------------------------->JMFF045N09**
                                                                                                                                                                         <---------------------------------------------rJMFF013J13**
                                                                                                                      ----------------------------------->JMFF023J23**
                                                                                                                      ------------------------------------>JMFF038H14**
                                                                                                                                                                      <---------------------------------------------------rJMFF022E24**
                                                                                                                       ---------------------------------------------->JMFF044I18**
                                                                                                                                                                <------------------------------------------------------rJMSF019A18**
                                                                                                                       ---------------->JMSF019A18**
                                                                                                                           ----------------------------------->JMFF007G22**
                                                                                                                      ---------------------------------->JMSF018P15**
                                                                                                                      -------------------------------------------->JMFF018N16**
                                                                                                                                                               <-------------------------------------------------------rJMSF018P15**
                                                                                                                       -------------------------------------------->JMSF033M21**
                                                                                                                                                                     <---------------------------------------------rJMSF033M21**
                                                                                                                          --------->JMFF022E24**
                                                                                                                                                               <--------------------------------------------------------rJMFF018N16**
                                                                                                                      -------------------------------------->JMFF013J13**
                                                                                                                                                                      <-------------------------------------------------rJMFF023J23**
                                                                                                                                                                                        <-----------------------------rJMFF044I18**
                                                                                                                                                                  <-----------------------------------------------------rJMFF007G22**
                                                                                                                                                                                       <------------------------------rJMFF045N09**