Contig 008052:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF046B23+                      AGAAAGGTTCATTTCCAACCGCAACATACCTGATGTTAACATTGTGGTT
                      ____________________________________________________________
consensus                        AGAAAGGTTCATTTCCAACCGCAACATACCTGATGTTAACATTGTGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF046B23+           TTTGATATGATCTGTGACGTTNTCAGAAACCCATTTCTCAGCCGCCTTTGAGCTAGCCAT
                      ____________________________________________________________
consensus             TTTGATATGATCTGTGACGTTNTCAGAAACCCATTTCTCAGCCGCCTTTGAGCTAGCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF046B23+           GGTGAGTAGCATATCATTGGGAATTCCAACCATGACCTCAATGCCAGAATTACTCAGGGC
                      ____________________________________________________________
consensus             GGTGAGTAGCATATCATTGGGAATTCCAACCATGACCTCAATGCCAGAATTACTCAGGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF009E12+            CTCAAGGTGTCATAATNTGCATCGAAAAGCTTAACCTTTTGGAACCCATTTTCCCTGAG
JMSF046B23+           TCTCAAGGTGTCATAATCTGCATCGAAAAGCTTAACCTTTTGGAACCCATTTTCCCTGAG
                      ____________________________________________________________
consensus             TCTCAAGGTGTCATAATCTGCATCGAAAAGCTTAACCTTTTGGAACCCATTTTCCCTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF009E12+           CATCCTCACCACAATCTCGGGTGGTAGGCGGTGAGTTGACTGTGTGCCCCAGTTAGCACC
JMSF046B23+           CATCCTCACCACAATCTCGGGTGGTAGGCGGTGAGTTGACTGTGTGCCCCAGTTAGCACC
                      ____________________________________________________________
consensus             CATCCTCACCACAATCTCGGGTGGTAGGCGGTGAGTTGACTGTGTGCCCCAGTTAGCACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF009E12+           TATAATCCCACTCACAGGACAAATTATCGAGGCCGATAAGAACAACATTAACACCATCCC
JMSF046B23+           TATAATCCCACTCACAGGACAAATTATCGAGGCCGATAAGAACAACATTAACACCATCCC
                      ____________________________________________________________
consensus             TATAATCCCACTCACAGGACAAATTATCGAGGCCGATAAGAACAACATTAACACCATCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF009E12+           AGAAAACCCCATTTTGATTCTTGAATCATCCAACTGGTAGATCCCCACACTCAACCCAAT
JMSF046B23+           AGAAAACCCCATTTTGATTCTTGAATCATCCAACTGGTAGATCCCCACGCTCAACCCAAT
                      ____________________________________________________________
consensus             AGAAAACCCCATTTTGATTCTTGAATCATCCAACTGGTAGATCCCCACGCTCAACCCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF009E12+           CAAGAATCTCCAAAGTGCTAAAGACAGCCTTTTTACTGAATCCCCTCTGAAGGTTTGGAG
JMSF046B23+           CAAGAATCTCCAAAGTGCTAAAGACAGCCTTTTTACTGAATCCCCTCTGAAGGTTTGGAG
                      ____________________________________________________________
consensus             CAAGAATCTCCAAAGTGCTAAAGACAGCCTTTTTACTGAATCCCCTCTGAAGGTTTGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF009E12+           GGTCAATGGAGGAACAGAAAAAGAGAAACCCAGAAAAAGTAAACTC              
JMSF046B23+           GGTCAATGGAGGAACAGAAAAAGAGAAACCCAGAAAAAGTAAACTCAGAAAAGGTAAGTC
                      ____________________________________________________________
consensus             GGTCAATGGAGGAACAGAAAAAGAGAAACCCAGAAAAAGTAAACTCAGAAAAGGTAAGTC