clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005M11 | Sequence | 486 | 009563 (8) | ref|XP_009791274.1| | 5e-45 | PREDICTED: ubiquitin receptor RAD23c-like isoform X1 [Nicotiana sylvestris] | 620 | 009563 (8) | ref|XP_010647738.1| | 294 | PREDICTED: ubiquitin receptor RAD23c isoform X1 [Vitis vinifera] |
JMFF025P08 | Sequence | 740 | 009563 (8) | ref|XP_002282352.1| | 300 | PREDICTED: ubiquitin receptor RAD23c isoform X2 [Vitis vinifera] emb|CBI27030.3| | |||||
JMFF034O05 | Sequence | 526 | 009563 (8) | emb|CDP19777.1| | 6e-66 | unnamed protein product [Coffea canephora] | 509 | 022364 | ref|XP_006482260.1| | 8e-44 | PREDICTED: ubiquitin receptor RAD23c-like isoform X1 [Citrus sinensis] |
JMSF046M23 | Sequence | 740 | 009563 (8) | emb|CDP19777.1| | 1e-89 | unnamed protein product [Coffea canephora] | 714 | 009563 (8) | ref|XP_002282352.1| | 302 | PREDICTED: ubiquitin receptor RAD23c isoform X2 [Vitis vinifera] emb|CBI27030.3| |
JMSF049B05 | Sequence | 682 | 009563 (8) | emb|CDP19777.1| | 4e-83 | unnamed protein product [Coffea canephora] | 791 | 009563 (8) | emb|CDP19777.1| | 1e-101 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
Contig22364 is a singlet.SCORE============================================Contig009563============================================1388 ============================================Contig022364============================================ ------------------------------------->JMFF034O05# <--------------------------------------rJMFF025P08- <---------------------------rJMSF049B05** ------------------------------------------------>JMSF049B05** ---------------------------->JMFF005M11** <------------------------------------rJMSF046M23** -------------------------------------------------->JMSF046M23** <--------------------------------------------rJMFF005M11**