clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF016L14 | Sequence | 580 | 002852 (12) | ref|XP_003518726.1| | 2e-57 | PREDICTED: 60S ribosomal protein L34-like [Glycine max] gb|KHN01221.1| 60S ribos | 540 | 002852 (12) | ref|XP_003518726.1| | 1e-57 | PREDICTED: 60S ribosomal protein L34-like [Glycine max] gb|KHN01221.1| 60S ribos |
JMFF020J05 | Sequence | 525 | 002852 (12) | ref|XP_003518726.1| | 1e-57 | PREDICTED: 60S ribosomal protein L34-like [Glycine max] gb|KHN01221.1| 60S ribos | 547 | 002852 (12) | ref|XP_003518726.1| | 1e-57 | PREDICTED: 60S ribosomal protein L34-like [Glycine max] gb|KHN01221.1| 60S ribos |
JMSF007B10 | Sequence | 238 | 002852 (12) | ref|XP_004138165.1| | 5e-35 | PREDICTED: 60S ribosomal protein L34-like [Cucumis sativus] ref|XP_004147322.1| | 542 | 002852 (12) | ref|XP_003518726.1| | 8e-58 | PREDICTED: 60S ribosomal protein L34-like [Glycine max] gb|KHN01221.1| 60S ribos |
JMSF022M17 | Sequence | 612 | 002852 (12) | ref|XP_003518726.1| | 2e-57 | PREDICTED: 60S ribosomal protein L34-like [Glycine max] gb|KHN01221.1| 60S ribos | 570 | 002852 (12) | ref|XP_003518726.1| | 1e-57 | PREDICTED: 60S ribosomal protein L34-like [Glycine max] gb|KHN01221.1| 60S ribos |
JMSF023M17 | Sequence | 621 | 018917 | ref|XP_004245542.1| | 1e-09 | PREDICTED: ethylene-responsive transcription factor CRF1 [Solanum lycopersicum] | 306 | 002852 (12) | ref|XP_010693235.1| | 6e-12 | PREDICTED: 60S ribosomal protein L34 [Beta vulgaris subsp. vulgaris] |
JMSF030M07 | Sequence | 608 | 002852 (12) | ref|XP_003518726.1| | 3e-57 | PREDICTED: 60S ribosomal protein L34-like [Glycine max] gb|KHN01221.1| 60S ribos | 563 | 002852 (12) | ref|XP_003518726.1| | 2e-57 | PREDICTED: 60S ribosomal protein L34-like [Glycine max] gb|KHN01221.1| 60S ribos |
JMSF031M07 | Sequence | 556 | 002852 (12) | ref|XP_003518726.1| | 2e-57 | PREDICTED: 60S ribosomal protein L34-like [Glycine max] gb|KHN01221.1| 60S ribos |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
Contig18917 is a singlet.SCORE============================================Contig018917============================================ ============================================Contig002852============================================ 572 <----------------------------------------------------rJMSF023M17# <------------------------------------------------------------------------------------------------rJMSF031M07- <----------------------------------------------------------------------------------------------rJMSF007B10** <-------------------------------------------------------------------------------------------rJMFF016L14** ----------------------------------------->JMSF007B10** <---------------------------------------------------------------------------------------------------rJMSF022M17** <-----------------------------------------------------------------------------------------------rJMFF020J05** --------------------------------------------------------------------->JMSF030M07** ------------------------------------------------------------------->JMFF016L14** ---------------------------------------------------------------------->JMSF022M17** ------------------------------------------------------------------------------------------->JMFF020J05** <-------------------------------------------------------------------------------------------------rJMSF030M07**