List of clones in pair P004176.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020I08Sequence568006846 (14)ref|XP_009610387.1|2e-24PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis]341006846 (14)
JMFF038M01Sequence700006846 (14)ref|XP_009610387.1|1e-37PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis]
JMFF041J05Sequence635006846 (14)ref|XP_009610387.1|1e-31PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis]601006846 (14)ref|XP_009610387.1|2e-38PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis]
JMSF001C13Sequence268015643ref|XP_007036578.1|2e-15Kinase superfamily protein [Theobroma cacao] gb|EOY21079.1| Kinase superfamily p679006846 (14)ref|XP_009610387.1|6e-48PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis]
JMSF010M05Sequence369006846 (14)ref|XP_009610387.1|1e-07PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis]765006846 (14)ref|XP_009610387.1|9e-61PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis]
JMSF014A17Sequence238006846 (14)ref|XP_009610387.1|1e-08PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis]801006846 (14)ref|XP_009610387.1|3e-66PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis]
JMSF039A19Sequence691006846 (14)ref|XP_009610387.1|1e-32PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis]761006846 (14)ref|XP_009610387.1|6e-47PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis]
JMSF042I01Sequence776006846 (14)ref|XP_009610387.1|2e-52PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis]833006846 (14)ref|XP_009610387.1|4e-49PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis]

Contig 15643 BLAST Hits against nr-aa DB Show

Contig 6846 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

Contig15643 is a singlet.
SCORE============================================Contig015643============================================             ============================================Contig006846============================================1219


                                                                                                                                                                 <-------------------------------------------------------rJMFF038M01- 
                                                                                                                                                  <------------------------------------------------------rJMSF001C13# 
                                                                                                                                                                 <------------------------------------------------rJMFF041J05**
                                                                                                                               ---------------------------------------------->JMFF020I08**
                                                                                                                                                       <--------------------------------------------------------------rJMSF039A19**
                                                                                                                             -------------------------------------------------------->JMSF039A19**
                                                                                                                                      <-----------------------------------------------------------------rJMSF014A17**
                                                                                                                                                                                              <---------------------------rJMFF020I08**
                                                                                                                         --------------------------------------------------------------->JMSF042I01**
                                                                                                                                                   <-------------------------------------------------------------------rJMSF042I01**
                                                                                                                                             <------------------------------------------------------------rJMSF010M05**
                                                                                                                               --------------------------------------------------->JMFF041J05**
                                                                                                                                 ------------------>JMSF014A17**
                                                                                                                      ----------------------------->JMSF010M05**