| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020I08 | Sequence | 568 | 006846 (14) | ref|XP_009610387.1| | 2e-24 | PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis] | 341 | 006846 (14) | |||
| JMFF038M01 | Sequence | 700 | 006846 (14) | ref|XP_009610387.1| | 1e-37 | PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis] | |||||
| JMFF041J05 | Sequence | 635 | 006846 (14) | ref|XP_009610387.1| | 1e-31 | PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis] | 601 | 006846 (14) | ref|XP_009610387.1| | 2e-38 | PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis] |
| JMSF001C13 | Sequence | 268 | 015643 | ref|XP_007036578.1| | 2e-15 | Kinase superfamily protein [Theobroma cacao] gb|EOY21079.1| Kinase superfamily p | 679 | 006846 (14) | ref|XP_009610387.1| | 6e-48 | PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis] |
| JMSF010M05 | Sequence | 369 | 006846 (14) | ref|XP_009610387.1| | 1e-07 | PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis] | 765 | 006846 (14) | ref|XP_009610387.1| | 9e-61 | PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis] |
| JMSF014A17 | Sequence | 238 | 006846 (14) | ref|XP_009610387.1| | 1e-08 | PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis] | 801 | 006846 (14) | ref|XP_009610387.1| | 3e-66 | PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis] |
| JMSF039A19 | Sequence | 691 | 006846 (14) | ref|XP_009610387.1| | 1e-32 | PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis] | 761 | 006846 (14) | ref|XP_009610387.1| | 6e-47 | PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis] |
| JMSF042I01 | Sequence | 776 | 006846 (14) | ref|XP_009610387.1| | 2e-52 | PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis] | 833 | 006846 (14) | ref|XP_009610387.1| | 4e-49 | PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF010M05- GGGTTCCAACCCCCAAATC
____________________________________________________________
consensus GGGTTCCAACCCCCAAATC
. : . : . : . : . : . :
JMSF010M05- AAATTCGCAACACTTTCCAAAGAGATCTGTCGCTTTAAAATCTTCCCCGAATTAGAACCC
JMSF042I01- GATCTGTCGCTTTAAAATCTTCCCCGAATTAGAACCC
____________________________________________________________
consensus AAATTCGCAACACTTTCCAAAGAGATCTGTCGCTTTAAAATCTTCCCCGAATTAGAACCC
. : . : . : . : . : . :
JMSF010M05- TAGACTAGATTACACCCAGGACCATAAAACACAATTCTGCTTCTCATTCGTCTCCTCGAT
JMSF039A19- AGGACCATAAAACACAATTCTGCTTCTCATTCGTCTCCTCGAT
JMSF014A17- AT
JMFF041J05- AAAACACAATTCTGCTTCTCATTCGTCTCCTCGAT
JMFF020I08- GCTTCTCATTCGTCTCCTCGAT
JMSF042I01- TAGACTAGATTACACCCAGGACCATAAAACACAATTCTGCTTCTCATTCGTCTCCTCGAT
____________________________________________________________
consensus TAGACTAGATTACACCCAGGACCATAAAACACAATTCTGCTTCTCATTCGTCTCCTCGAT
. : . : . : . : . : . :
JMSF010M05- ACTCGTAGGTTTTGCGTCTGCCGCTTGTGGTTGGAGTTCTCGGAGCGCTTCCTTGATTTA
JMSF039A19- ACTCGTAGGTTTTGCGTCTGCCGCTTGTGGTTGGAGTTCTCGGAGCGCTTCCTTGATTTA
JMSF014A17- ACTCGTAGGTTTTGCGTCTGCCGCTTGTGGTTGGAGTTCTCGGAGCGCTTCCTTGATTTA
JMFF041J05- ACTCGTAGGTTTTGCGTCTGCCGCTTGTGGTTGGAGTTCTCGGAGCGCTTCCTTGATTTA
JMFF020I08- ACTCGTAGGTTTTGCGTCTGCCGCTTGTGGTTGGAGTTCTCGGAGCGCTTCCTTGATTTA
JMSF042I01- ACTCGTAGGTTTTGCGTCTGCCGCTTGTGGTTGGAGTTCTCGGAGCGCTTCCTTGATTTA
____________________________________________________________
consensus ACTCGTAGGTTTTGCGTCTGCCGCTTGTGGTTGGAGTTCTCGGAGCGCTTCCTTGATTTA
. : . : . : . : . : . :
JMSF010M05- GGGTATATAAGGCACATCTACCCGTTGATCATAGTATGAGCACTCAGGAA-CAAAGGGCT
JMSF039A19- GGGTATATAAGGCACATCTACCCGTTGATCATAGTATGAGCACTCAGGAA-CAAAGGGCT
JMSF014A17- GGGTATATAAGGCACATCTACCCGTTGATCATAGTATGAGCACTCAGGAA-CAAAGGGCT
JMFF041J05- GGGTATATAAGGCACATCTACCCGTTGATCATAGTATGAGCACTCAGGAA-CAAAGGGCT
JMFF020I08- GGGTATATAAGGCACATCTACCCGTTGATCATAGTATGAGCACTCAGGAA-CAAAGGGCT
JMSF042I01- GGGTATATAAGGCACATCTACCCGTTGATCATAGTATGAGCACTCAGGAA-CAAAGGGCT
rJMSF014A17+ ATATAAGGCACATCTACCCGTTGATCATAGTATGAGCACTCAGGAANCAAAGGGCT
____________________________________________________________
consensus GGGTATATAAGGCACATCTACCCGTTGATCATAGTATGAGCACTCAGGAA-CAAAGGGCT
. : . : . : . : . : . :
JMSF010M05- CAACCTCACAGGTACACACGGGGATTTCAGAGGAGGAAGAGGTTATTAAATGTTGATCTC
JMSF039A19- CAACCTCACAGGTACACACGGGGATTTCAGAGGAGGAAGAGGTTATTAAATGTTGATCTC
JMSF014A17- CAACCTCACAGGTACACACGGGGATTTCAGAGGAGGAAGAGGTTATTAAATGTTGATCTC
JMFF041J05- CAACCTCACAGGTACACACGGGGATTTCAGAGGAGGAAGAGGTTATTAAATGTTGATCTC
JMFF020I08- CAACCTCACAGGTACACACGGGGATTTCAGAGGAGGAAGAGGTTATTAAATGTTGATCTC
JMSF042I01- CAACCTCACAGGTACACACGGGGATTTCAGAGGAGGAAGAGGTTATTAAATGTTGATCTC
rJMSF014A17+ CAACCTCACAGGTACACACGGGGATTTCAGAGGAGGAAGAGGTTATTAAATGTTGATCTC
rJMSF010M05+ TTCAGAGGAGGAAGAGGTTATTAAATGTTGATCTC
____________________________________________________________
consensus CAACCTCACAGGTACACACGGGGATTTCAGAGGAGGAAGAGGTTATTAAATGTTGATCTC
. : . : . : . : . : . :
JMSF010M05- AATGCTGTGCCATCATGGGAGCACCTGGATCATGAGGGAACTTCAGCTCCT
JMSF039A19- AATGCTGTGCCATCATGGGAGCACCTGGATCATGAGGGAACTTCAGCTCCTGTTGTTTCT
JMSF014A17- AATGCTGTGCCATCATGGGAGCACCTGGATCATGAGGGAACTTCAGCT
JMFF041J05- AATGCTGTGCCATCATGGGAGCACCTGGATCATGAGGGAACTTCAGCTCCTGTTGTTTCT
JMFF020I08- AATGCTGTGCCATCATGGGAGCACCTGGATCATGAGGGAACTTCAGCTCCTGTTGTTTCT
JMSF042I01- AATGCTGTGCCATCATGGGAGCACCTGGATCATGAGGGAACTTCAGCTCCTGTTGTTTCT
rJMSF014A17+ AATGCTGTGCCATCATGGGAGCACCTGGATCATGAGGGAACTTCAGCTTCTGTTGTTTCT
rJMSF001C13+ GGATCATGAGGGAACTTCAGCTCCTGTTGTTTCT
rJMSF010M05+ AATGCTGTGCCATCATGGGAGCACCTGGATCATGAGGGAACTTCAGCTCCTGTTGTTTCT
rJMSF042I01+ AGCTCCTGTTGTTTCT
____________________________________________________________
consensus AATGCTGTGCCATCATGGGAGCACCTGGATCATGAGGGAACTTCAGCTCCTGTTGTTTCT
. : . : . : . : . : . :
JMSF039A19- CAAGATGTGCCACCCGGTCAAAGAGTTGCTTCTTTGACATCTGAAACAATTGATATTGAT
JMFF041J05- CAAGATGTGCCACCCGGTCAAAGAGTTGCTTCTTTGACATCTGAAACAATTGATATTGAT
JMFF020I08- CAAGATGTGCCACCCGGTCAAAGAGTTGCTTCTTTGACATCTGAAACAATTGATATTGAT
JMSF042I01- CAAGATGTGCCACCCGGTCAAAGAGTTGCTTCTTTGACATCTGAAACAATTGATATTGAT
rJMSF014A17+ CAAGATGTGCCACCCGGTCAAAGAGTTGCTTCTTTGACATCTGAAACAATTGATATTGAT
rJMSF001C13+ CAAGATGTGCCACCCGGTCAAAGAGTTG-TTTTTTGACATCTGAAACAATTGATATTGAT
rJMSF010M05+ CAAGATGTGCCACCCGGTCAAAGAGTTGCTTCTTTGACATCTGAAACAATTGATATTGAT
rJMSF039A19+ ACATNTGAAACAATTGATATTGAT
rJMSF042I01+ CAAGATGTGCCACCCGGTCAAAGAGTTGCTTCTTTGACATNTGAAACAATTGATATTGAT
____________________________________________________________
consensus CAAGATGTGCCACCCGGTCAAAGAGTTGCTTCTTTGACATCTGAAACAATTGATATTGAT
. : . : . : . : . : . :
JMSF039A19- GGGCTTGATGATGATGATGATGTTGTTATTATATCCTCTCCTCGTGCACTTGCTGAAGCT
JMFF041J05- GGGCTTGATGATGATGATGATGTTGTTATTATATCCACTCCTCGTGCACTTGCTGAAGCT
JMFF020I08- GGGCTTGATGATGATGATGATGTTGTTATTATATCCTCTCCTCGTGCACTTGCTGAAGCT
JMSF042I01- GGGCTTGATGATGATGATGATGTTGTTATTATATCCTCTCCTCGTGCACTTGCTGAAGCT
rJMSF014A17+ GGGCTTGATGATGATGATGATGTTGTTATTATATCCTCTCCTCGTGCACTTGCTGAAGCT
rJMSF001C13+ GGGCTTGATGATGATGATGATGTTGTTATTATATCCTCTCCTCGTGCACTTGCTGAAGCT
rJMSF010M05+ GGGCTTGATGATGATGATGATGTTGTTATTATATCCTCTCCTCGTGCACTTGCTGAAGCT
rJMSF039A19+ GGGCTTGATGATGATGATGATGTTGTTATTATATCCTCTCCTCGTGCACTTGNTGAAGCT
rJMSF042I01+ GGGCTTGATGATGATGATGATGTTGTTATTATATCCTCTCCTCGTGCACTTGCTGAAGCT
____________________________________________________________
consensus GGGCTTGATGATGATGATGATGTTGTTATTATATCCTCTCCTCGTGCACTTGCTGAAGCT
. : . : . : . : . : . :
JMSF039A19- AAAAACAACTCCATGAGGAATCGTCGGCAGACTGTTGTGGTTAATGTGGATTCTGAAGAG
JMFF041J05- AAAAACAACTCCATGAGGAATCGTCGGCAGACTGTTGTGGTTAATGTGGATTCTGAAGAG
JMFF020I08- AAAAACAACTCCATGAGGAATCGTCGGCAGACTGTTGTGGTTAATGTGGATTCTGAAGAG
JMSF042I01- AAAAACAACTCCATGAGGAATCGTCGGCAGACTGTTGTGGTTAATGTGGATTCTGAAGAG
rJMSF014A17+ AAAAACAACTCCATGAGGAATCGTCGGCAGACTGTTGTGGTTAATGTGGATTCTGAAGAG
rJMSF001C13+ AAAAACAACTCCATGAGGAATCGTCGGCAGACTGTTGTGGTTAATGTGGATTCTGAAGAG
rJMSF010M05+ AAAAACAACTCCATGAGGAATCGTCGGCAGACTGTTGTGGTTAATGTGGATTCTGAAGAG
rJMFF041J05+ CAGACTGTTGTGGTTAATGTGGATTCTGAAGAG
rJMSF039A19+ AAAAACAACTCCATGAGGAATCGTCGGCAGACTGTTGTGGTTAATGTGGATTCTGAAGAG
rJMSF042I01+ AAAAACAACTCCATGAGGAATCGTCGGCAGACTGTTGTGGTTAATGTGGATTCTGAAGAG
rJMFF038M01+ ATCGTCGGCAGACTGTTGTGGTTAATGTGGATTNTGAAGAG
____________________________________________________________
consensus AAAAACAACTCCATGAGGAATCGTCGGCAGACTGTTGTGGTTAATGTGGATTCTGAAGAG
. : . : . : . : . : . :
JMSF039A19- CATTTGTCTAGGGTCCCTCCTCATAACACCTACAAGCGCANAAGATTTCCTACACATCAN
JMFF041J05- CATTTGTCTAGGGTCCCTCCTCATAACACCTACAAGCGCAGAAGATTTCCTACACATCAG
JMFF020I08- CATTTGTCTAGGGTCCCTCCTCATAACACCTACAAGCGCAGAAGATTTCCTACACATCAG
JMSF042I01- CATTTGTCTAGGGTCCCTCCTCATAACACCTACAAGCGCAGAAGATTTCCTACACATCAG
rJMSF014A17+ CATTTGTCTAGGGTCCCTCCTCATAACACCTACAAGCGCAGAAGATTTCCTACACATCAG
rJMSF001C13+ CATTTGTCTAGGGTCCCTCCTCATAACACCTACAAGCGCAGAAGATTTCCTACACATCAG
rJMSF010M05+ CATTTGTCTAGGGTCCCTCCTCATAACACCTACAAGCGCAGAAGATTTCCTACACATCAG
rJMFF041J05+ CATTTGTCTAGGGTCCCTCCTCATAACACCTACAAGCGCAGAAGATTTCCTACACATCAG
rJMSF039A19+ CATTTGTCTAGGGTCCCTCCTCATAACACCTACAAGCGCAGAAGATTTCCTACACATCAG
rJMSF042I01+ CATTTGTCTAGGGTCCCTCCTCATAACACCTACAAGCGCAGAAGATTTCCTACACATCAG
rJMFF038M01+ CATTTGTCTAGGGTCCCTCCTCATAACACNTACAAGCGCAGAAGATTTCCTACACATCAG
____________________________________________________________
consensus CATTTGTCTAGGGTCCCTCCTCATAACACCTACAAGCGCAGAAGATTTCCTACACATCAG
. : . : . : . : . : . :
JMSF039A19- TCAGTTATAAACCTTGAAGGATATANCAACTCAAAGGGAGATAATGACCCATTGGTANCG
JMFF041J05- TCAGTTATAAACCTTGAAGGATATAGCAACTCAAAGGGAGATAATGACCCATTGGTAGCG
JMFF020I08- TCAGTTATAAACCTTGAAGGATATAGCAACTCAAAGGGAGATAATGACCCATTGGTAGCG
JMSF042I01- TCAGTTATAAACCTTGAAGGATATAGCAACTCAAAGGGAGATAATGACCCATTGGTAGCG
rJMSF014A17+ TCAGTTATAAACCTTGAAGGATATAGCAACTCAAAGGGAGATAATGACCCATTGGTAGCG
rJMSF001C13+ TCAGTTATAAACCTTGAAGGATATAGCAACTCAAAGGGAGATAATGACCCATTGGTAGCG
rJMSF010M05+ TCAGTTATAAACCTTGAAGGATATAGCAACTCAAAGGGAGATAATGACCCATTGGTAGCG
rJMFF041J05+ TCAGTTATAAACCTTGAAGGATATAGCAACTCAAAGGGAGATAATGACCCATTGGTAGCG
rJMSF039A19+ TCAGTTATAAACCTTGAAGGATATAGCAACTCAAAGGGAGATAATGACCCATTGGTAGCG
rJMSF042I01+ TCAGTTATAAACCTTGAAGGATATAGCAACTCAAAGGGAGATAATGACCCATTGGTAGCG
rJMFF038M01+ TCAGTTATAAACCTTGAAGGATATAGCAACTCAAAGGGAGATAATGACCCATTGGTAGCG
____________________________________________________________
consensus TCAGTTATAAACCTTGAAGGATATAGCAACTCAAAGGGAGATAATGACCCATTGGTAGCG
. : . : . : . : . : . :
JMSF039A19- GTAGCTCCACCTCCACCTCCACCAAAGGAGCCTACATTCANTTGTCCAGTTTGCATGGGT
JMFF041J05- GTAGCTCCACCTCCACCTCCACCAAAGGAGCCTACATTCAGTTGTCCAGTTTGCATGGGT
JMFF020I08- GTAGCTC
JMSF042I01- GTAGCTCCACCTCCACCTCCACCAAAGGAGCCTACATTCAGTTGTCCAGTTTGCATGGGT
rJMSF014A17+ GTAGCTCCACCTCCACCTCCACCAAAGGAGCCTACATTCAGTTGTCCAGTTTGCATGGGT
rJMSF001C13+ GTAGCTCCACCTCCACCTCCACCAAAGGAGCCTACATTCAGTTGTCCAGTTTGCATGGGT
rJMSF010M05+ GTAGCTCCACCTCCACCTCCACCAAAGGAGCCTACATTCAGTTGTCCAGTTTGCATGGGT
rJMFF041J05+ GTAGCTCCACCTCCACCTCCACCAAAGGAGCCTACATTCAGTTGTCCAGTTTGCATGGGT
rJMSF039A19+ GTAGCTCCACCTCCACCTCCACCAAAGGAGCCTACATTCAGTTGTCCAGTTTGCATGGGT
rJMSF042I01+ GTAGCTCCACCTCCACCTCCACCAAAGGAGCCTACATTCAGTTGTCCAGTTTGCATGGGT
rJMFF038M01+ GTAGCTCCACCTCCACCTCCACCAAAGGAGCCTACATTCAGTTGTCCAGTTTGCATGGGT
____________________________________________________________
consensus GTAGCTCCACCTCCACCTCCACCAAAGGAGCCTACATTCAGTTGTCCAGTTTGCATGGGT
. : . : . : . : . : . :
JMSF039A19- CCATTANTCNAGGANATGTCAACCAAGTGTGGTCATATTTTTTGTAAG
JMFF041J05- C
JMSF042I01- CCATTAGTCGAGGAGATGTCAACCAAGTGTGGTCATATTTTTTGTAAGGCGTGTATCAAA
rJMSF014A17+ CCATTAGTCGAGGAGATGTCAACCAAGTGTGGTCATATTTTTTGTAAGGCGTGTATCAAA
rJMSF001C13+ CCATTAGTCGAGGAGATGTCAACCAAGTGTGGTCATATTTTTTGTAAGGCGTGTATCAAA
rJMSF010M05+ CCATTAGTCGAGGAGATGTCAACCAAGTGTGGTCATATTTTTTGTAAGGCGTGTATCAAA
rJMFF041J05+ CCATTAGTCGAGGAGATGTCAACCAAGTGTGGTCATATTTTTTGTAAGGCGTGTATCAAA
rJMSF039A19+ CCATTAGTCGAGGAGATGTCAACCAAGTGTGGTCATATTTTTTGTAAGGCGTGTATCAAA
rJMSF042I01+ CCATTAGTCGAGGAGATGTCAACCAAGTGTGGTCATATTTTTTGTAAGGCGTGTATCAAA
rJMFF038M01+ CCATTAGTCGAGGAGATGTCAACCAAGTGTGGTCATATTTTTTGTAAGGCGTGTATCAAA
____________________________________________________________
consensus CCATTAGTCGAGGAGATGTCAACCAAGTGTGGTCATATTTTTTGTAAGGCGTGTATCAAA
. : . : . : . : . : . :
JMSF042I01- GCTTCCATAGCTGCTCAGG
rJMSF014A17+ GCTTCCATAGCTGCTCAGGGTAAATGCCCTACATGTAGGAGGAAGATTACCATGAAAGGC
rJMSF001C13+ GCTTCCATAGCTGCTCAGGGTAAATGCCCTACATGTAGGAGGAAGATTACCATGAAAGGC
rJMSF010M05+ GCTTCCATAGCTGCTCAGGGTAAATGCCCTACATGTAGGAGGAAGATTACCATGAAAGGC
rJMFF041J05+ GCTTCCATAGCTGCTCAGGGTAAATGCCCTACATGTAGGAGGAAGATTACCATGAAAGGC
rJMSF039A19+ GCTTCCATAGCTGCTCAGGGTAAATGCCCTACATGTAGGAGGAAGATTACCATGAAAGGC
rJMSF042I01+ GCTTCCATAGCTGCTCAGGGTAAATGCCCTACATGTAGGAGGAAGATTACCATGAAAGGC
rJMFF038M01+ GCTTCCATAGCTGCTCAGGGTAAATGCCCTACATGTAGGAGGAAGATTACCATGAAAGGC
____________________________________________________________
consensus GCTTCCATAGCTGCTCAGGGTAAATGCCCTACATGTAGGAGGAAGATTACCATGAAAGGC
. : . : . : . : . : . :
rJMSF014A17+ ACCATTAGAGTTTACCTGCCTGCCACAAGCTGAGCTTGGTGGTTAAACACCCCACCCCTG
rJMSF001C13+ ACCATTAGAGTTTACCTGCCTGCCACAAGCTGAGCTTGGTGGTTAAACACCCCACCCCTG
rJMSF010M05+ ACCATTAGAGTTTACCTGCCTGCCACAAGCTGAGCTTGGTGGTTAAACACCCCACCCCTG
rJMFF041J05+ ACCATTAGAGTTTACCTGCCTGCCACAAGCTGAGCTTGGTGGTTAAACACCCCACCCCTG
rJMSF039A19+ ACCATTAGAGTTTACCTGCCTGCCACAAGCTGAGCTTGGTGGTTAAACACCCCACCCCTG
rJMSF042I01+ ACCATTAGAGTTTACCTGCCTGCCACAAGCTGAGCTTGGTGGTTAAACACCCCACCCCTG
rJMFF038M01+ ACCATTAGAGTTTACCTGCCTGCCACAAGCTGAGCTTGGTGGTTAAACACCCCACCCCTG
rJMFF020I08+ CCTGCCACAAGCTGAGCTTGGTGGTTAAACACCCCACCCCTG
____________________________________________________________
consensus ACCATTAGAGTTTACCTGCCTGCCACAAGCTGAGCTTGGTGGTTAAACACCCCACCCCTG
. : . : . : . : . : . :
rJMSF014A17+ CCCCTCTCCCCTTGTGCTGCGGTAATAGCGCCTTGGGTAAGCATACTTAGATATAGAGAA
rJMSF001C13+ CCCCTCTCCCCTTGTGCTGCGGTAATAGCGCCTTGGGTAAGCATACTTAGATATAGAGAA
rJMSF010M05+ CCCCTCTCCCCTTGTGCTGCGGTAATAGCGCCT----TAAGCATACTTAGATATAGAGAA
rJMFF041J05+ CCCCTCTCCCCTTGTGCTGCGGTAATAGCGCCTTGGGTAAGCATACTTAGATATAGAGAA
rJMSF039A19+ CCCCTCTCCCCTTGTGCTGCGGTAATAGCGCCTTGGGTAAGCATACTTAGATATAGAGAA
rJMSF042I01+ CCCCTCTCCCCTTGTGCTGCGGTAATAGCGCCTTGGGTAAGCATACTTAGATATAGAGAA
rJMFF038M01+ CCCCTCTCCCCTTGTGCTGCGGTAATAGCGCCTTGGGTAAGCATACTTAGATATAGAGAA
rJMFF020I08+ CCCCTCTCCCCTTGTGCTGCGGTAATAGCGCCTTGGGTAAGCATACTTAGATATAGAGAA
____________________________________________________________
consensus CCCCTCTCCCCTTGTGCTGCGGTAATAGCGCCTTGGGTAAGCATACTTAGATATAGAGAA
. : . : . : . : . : . :
rJMSF014A17+ A-CTGGAAATTTATGTCTCGACATCC
rJMSF001C13+ A-CTGGAAATTTATGTCTCGACATCCTATTATC
rJMSF010M05+ ACCTGGAAATTTATGTCTCGACATCCTATTATCTTTGACCAATGCAACCCT
rJMFF041J05+ A-CTGGAAATTTATGTCTCGACATCCTATTATCTTTTGACAATGCAACCCTTGCTGCTTT
rJMSF039A19+ A-CTGGAAATTTATGTCTCGACATCCTATTATCTTTTGACAATGCAACCCTTGCTGCTTT
rJMSF042I01+ A-CTGGAAATTTATGTCTCGACATCCTATTATCTTTTGACAATGCAACCCTTGCTGCTTT
rJMFF038M01+ A-CTGGAAATTTATGTCTCGACATCCTATTATCTTTTGACAATGCAACCCTTGCTGCTTT
rJMFF020I08+ A-CTGGAAATTTATGTCTCGACATCCTATTATCTTTTGACAATGCAACCCTTGCTGCTTT
____________________________________________________________
consensus A-CTGGAAATTTATGTCTCGACATCCTATTATCTTTTGACAATGCAACCCTTGCTGCTTT
. : . : . : . : . : . :
rJMFF041J05+ TTATGCATGAAAAACTCGCTTTCAGACAATTTCTTGTAAATCTTGAAGTGCTCTTTTAGA
rJMSF039A19+ TTATGCATGAAAAACTCGCTTTCAGACAATTTCTTGTAAATCTTGAAGTGCTCTTTTAGA
rJMSF042I01+ TTATGCATGAAAAACTCGCTTTCAGACAATTTCTTGTAAATCTTGAAGTGCTCTTTTAGA
rJMFF038M01+ TTATGCATGAAAAACTCGCTTTCAGACAATTTCTTGTAAATCTTGAAGTGCTCTTTTAGA
rJMFF020I08+ TTATGCATGAAAAACTCGCTTTCAGACAATTTCTTGTAAATCTTGAAGTGCTCTTTTAGA
____________________________________________________________
consensus TTATGCATGAAAAACTCGCTTTCAGACAATTTCTTGTAAATCTTGAAGTGCTCTTTTAGA
. : . : . : . : . : . :
rJMFF041J05+ TGAATGAACAAAATCCAGATTGACAATGC
rJMSF039A19+ TGAATGAACAAAATCCAGATTGACAATGCAACCCTTGCTGCATTTTATGCATGAAAAACT
rJMSF042I01+ TGAATGAACAAAATCCAGATTGACAATGCAACCCTTGCTGCATTTTATGCATGAAAAACT
rJMFF038M01+ TGAATGAACAAAATCCAGATTGACAATGCAACCCTTGCTGCATTTTATGCATGAAAAACT
rJMFF020I08+ TGAATGAACAAAATCCAGATTGACAATGCAACCCTTGCTGCATTTTATGCATGAAAAACT
____________________________________________________________
consensus TGAATGAACAAAATCCAGATTGACAATGCAACCCTTGCTGCATTTTATGCATGAAAAACT
. : . : . : . : . : . :
rJMSF039A19+ CTCTTTCAGACAATTTCT
rJMSF042I01+ CTCTTTCAGACAATTTCTTGTAAATCT
rJMFF038M01+ CTCTTTCAGACAATTTCTTGTAAATCTTGAAGTGCTCTTTTAGA
rJMFF020I08+ CTCTTTCAGACAATTTCTTGTAAATCTTGAAGTGCTCTTTTAGAGAAGAACAAAATCCAG
____________________________________________________________
consensus CTCTTTCAGACAATTTCTTGTAAATCTTGAAGTGCTCTTTTAGAGAAGAACAAAATCCAG