clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF027J20 | Sequence | 434 | 004963 (18) | ref|XP_006408585.1| | 1e-47 | hypothetical protein EUTSA_v10002103mg [Eutrema salsugineum] gb|ESQ50038.1| hypo | 634 | 004963 (18) | ref|XP_006292807.1| | 1e-72 | hypothetical protein CARUB_v10019058mg [Capsella rubella] gb|EOA25705.1| hypothe |
JMFF032N04 | Sequence | 456 | 004963 (18) | gb|AFY26192.1| | 1e-48 | calmodulin-1 [Vaccinium corymbosum] | 678 | 004963 (18) | ref|XP_006292807.1| | 1e-72 | hypothetical protein CARUB_v10019058mg [Capsella rubella] gb|EOA25705.1| hypothe |
JMFF040P17 | Sequence | 570 | 004963 (18) | ref|XP_006292807.1| | 5e-101 | hypothetical protein CARUB_v10019058mg [Capsella rubella] gb|EOA25705.1| hypothe | 680 | 004963 (18) | ref|XP_006292807.1| | 2e-100 | hypothetical protein CARUB_v10019058mg [Capsella rubella] gb|EOA25705.1| hypothe |
JMFN003A15 | Sequence | 554 | 003551 (2) | ref|XP_006485938.1| | 4e-68 | PREDICTED: RNA-binding protein 38-like isoform X1 [Citrus sinensis] | |||||
JMFN007E22 | Sequence | 626 | 004963 (18) | ref|XP_003632230.1| | 4e-101 | PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera] | |||||
JMFN007E24 | Sequence | 625 | 004963 (18) | ref|XP_003632230.1| | 4e-101 | PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera] | |||||
JMFN016I08 | Sequence | 641 | 004963 (18) | ref|XP_006292807.1| | 1e-100 | hypothetical protein CARUB_v10019058mg [Capsella rubella] gb|EOA25705.1| hypothe | |||||
JMFN031B22 | Sequence | 613 | 004963 (18) | ref|XP_003632230.1| | 1e-100 | PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera] | |||||
JMFN034H01 | Sequence | 637 | 004963 (18) | ref|XP_003632230.1| | 5e-101 | PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera] | |||||
JMFN036K13 | Sequence | 617 | 004963 (18) | ref|XP_003632230.1| | 4e-101 | PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera] | |||||
JMFS015F06 | Sequence | 554 | 004963 (18) | ref|XP_006292807.1| | 3e-100 | hypothetical protein CARUB_v10019058mg [Capsella rubella] gb|EOA25705.1| hypothe | |||||
JMSF006M01 | Sequence | 392 | 003551 (2) | ref|XP_006340455.1| | 6e-30 | PREDICTED: RNA-binding protein 38-like isoform X2 [Solanum tuberosum] | 374 | 004963 (18) | gb|AAD10247.1| | 3e-16 | calmodulin [Phaseolus vulgaris] |
JMSF006O03 | Sequence | 112 | 004963 (18) | 400 | 004963 (18) | gb|AAD10247.1| | 1e-31 | calmodulin [Phaseolus vulgaris] | |||
JMSF012D10 | Sequence | 226 | 004963 (18) | gb|AAB31257.1| | 3e-17 | calmodulin homolog {EST} [Brassica napus, Naehan, root, Peptide Partial, 53 aa] | 665 | 004963 (18) | ref|XP_006292807.1| | 2e-100 | hypothetical protein CARUB_v10019058mg [Capsella rubella] gb|EOA25705.1| hypothe |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003551============================================ 692 ============================================Contig004963============================================ 737 169 -------------------------------------------------------->JMSF006M01 <-----------------rJMSF006M01 ----------------------------------------------------------------->JMFN003A15- ----------------------------------------------------------------------------------->JMFN036K13- ------------------------------------------------------------------------->JMFS015F06- -------------------------------------------------------------------------------------->JMFN034H01- ------------------------------------------------------------------------------------>JMFN007E22- ------------------------------------------------------------------------------------>JMFN007E24- -------------------------------------------------------------------------------------->JMFN016I08- ---------------------------------------------------------------------------------->JMFN031B22- <------------------------rJMSF006O03** <-------------------------------------------------------------------------------------rJMFF027J20** ----------------------------------------------------------------------------->JMFF040P17** ---------------------------------------------------------->JMFF027J20** <------------------------------------------------------------------------------------------rJMFF040P17** <---------------------------------------------------------------------------------------rJMFF032N04** <-----------------------------------------------------------------------------------------rJMSF012D10** -------------->JMSF006O03** ------------------------------------------------------------->JMFF032N04** ------------------------------>JMSF012D10**