clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF009K06 | Sequence | 594 | 008200 (10) | ref|XP_011003959.1| | 3e-87 | PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial [Populus eup | 824 | 008200 (10) | ref|XP_009588299.1| | 1e-135 | PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial [Nicotiana t |
JMFF016L07 | Sequence | 282 | 008200 (10) | ref|XP_009787812.1| | 2e-37 | PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial-like [Nicoti | |||||
JMFF016L16 | Sequence | 592 | 008200 (10) | ref|XP_011003959.1| | 2e-86 | PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial [Populus eup | 853 | 008200 (10) | ref|XP_006345780.1| | 9e-144 | PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial-like [Solanu |
JMSF030O13 | Sequence | 675 | 008200 (10) | ref|XP_011003959.1| | 6e-103 | PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial [Populus eup | 737 | 008200 (10) | ref|XP_009588299.1| | 1e-127 | PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial [Nicotiana t |
JMSF042P15 | Sequence | 577 | 014741 | ref|XP_004235838.1| | 2e-90 | PREDICTED: DNA-directed RNA polymerase V subunit 7 [Solanum lycopersicum] | 545 | 008200 (10) | ref|XP_009787812.1| | 2e-75 | PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial-like [Nicoti |
JMSF045J18 | Sequence | 792 | 008200 (10) | ref|XP_009785442.1| | 6e-132 | PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial [Nicotiana s | 691 | 008200 (10) | ref|XP_009787812.1| | 2e-101 | PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial-like [Nicoti |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
Contig14741 is a singlet.SCORE============================================Contig014741============================================ ============================================Contig008200============================================1570 <------------------------rJMSF042P15# <-----------------rJMFF016L07- <------------------------------------------rJMSF045J18** <-----------------------------------------------------rJMFF016L16** ------------------------------------->JMFF009K06** <-----------------------------------------rJMFF009K06** <---------------------------------------------rJMSF030O13** ------------------------------------------>JMSF030O13** ------------------------------------------------->JMSF045J18** ------------------------------------->JMFF016L16**