List of clones in pair P002962.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051B23Sequence630011823 (20)502006227 (9)dbj|BAE71241.1|6e-25putative Argonaute protein [Trifolium pratense]
JMFN029B03Sequence617006227 (9)gb|KDO41892.1|4e-93hypothetical protein CISIN_1g0014661mg, partial [Citrus sinensis] gb|KDO41893.1|
JMFN038C08Sequence597006227 (9)gb|KDO41892.1|2e-88hypothetical protein CISIN_1g0014661mg, partial [Citrus sinensis] gb|KDO41893.1|
JMFN039P11Sequence630006227 (9)ref|NP_001159239.1|5e-142uncharacterized protein LOC100304327 [Zea mays] gb|ACN25552.1| unknown [Zea mays
JMFS008D05Sequence599011823 (20)gb|ABC61502.1|2e-100AGO1-1, partial [Nicotiana benthamiana]
JMFS048B02Sequence624006227 (9)ref|XP_009793489.1|418PREDICTED: protein argonaute 1B-like isoform X3 [Nicotiana sylvestris]
JMFS054G07Sequence599006227 (9)ref|XP_009793489.1|399PREDICTED: protein argonaute 1B-like isoform X3 [Nicotiana sylvestris]
JMFS067A06Sequence619011823 (20)gb|EPS70198.1|2e-117hypothetical protein M569_04564, partial [Genlisea aurea]
JMFS071B06Sequence597011823 (20)ref|XP_009793489.1|207PREDICTED: protein argonaute 1B-like isoform X3 [Nicotiana sylvestris]
JMFS072B07Sequence243006227 (9)gb|KEH26854.1|2e-04argonaute protein 1A [Medicago truncatula]
JMFS079B10Sequence615011823 (20)gb|ABC61502.1|2e-94AGO1-1, partial [Nicotiana benthamiana]
JMFS079E08Sequence553011823 (20)
JMFS081C06Sequence507011823 (20)
JMFS084C05Sequence243006227 (9)gb|KEH26854.1|2e-04argonaute protein 1A [Medicago truncatula]
JMFS088F10Sequence539011823 (20)emb|CDO98607.1|5e-05unnamed protein product [Coffea canephora]
JMFS095G09Sequence454011823 (20)
JMFS102B11Sequence560011823 (20)ref|XP_009606253.1|8e-04PREDICTED: protein argonaute 1-like isoform X3 [Nicotiana tomentosiformis]
JMFS104G11Sequence598011823 (20)emb|CDO98607.1|2e-05unnamed protein product [Coffea canephora]
JMFS108E01Sequence522011823 (20)
JMFS110B02Sequence655011823 (20)
JMFS124D11Sequence573011823 (20)gb|ABC61502.1|1e-85AGO1-1, partial [Nicotiana benthamiana]
JMFS128B11Sequence617011823 (20)gb|KDO41885.1|1e-128hypothetical protein CISIN_1g0014662mg, partial [Citrus sinensis] gb|KDO41886.1|
JMFS146E11Sequence604011823 (20)
JMFS148B06Sequence391011823 (20)
JMFS156B02Sequence256011823 (20)
JMFS156C04Sequence400011823 (20)
JMSF032H24Sequence708011823 (20)emb|CDO98607.1|6e-09unnamed protein product [Coffea canephora]631006227 (9)gb|KDO41892.1|2e-103hypothetical protein CISIN_1g0014661mg, partial [Citrus sinensis] gb|KDO41893.1|

Contig 11823 BLAST Hits against nr-aa DB Show

Contig 6227 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig011823============================================1698         ============================================Contig006227============================================1758
 207             ------------------------>JMFF051B23                                                                                                                                          <----------------------------rJMFF051B23  
 377             ------------------------------->JMSF032H24                                                                                                                 <-----------------------------------rJMSF032H24  
          -------------------------------->JMFS102B11-                                                                
                                        --------------------------------->JMFS008D05-                                 
                                    ----------------------------------->JMFS079B10-                                   
              ----------------------------->JMFS108E01-                                                               
                      --------------------->JMFS088F10-                                                               
                                     --------------------------------->JMFS124D11-                                    
                 -------------------------->JMFS079E08-                                                               
                           ---------------------------------->JMFS071B06-                                             
                                                                         ------------------------------->JMFS067A06-  
              ----------------------------->JMFS081C06-                                                               
          <--------------JMFS156B02-                                                                                  
          ---------------------------------->JMFS104G11-                                                              
                                                      ----------------------------------->JMFS128B11-                 
                ------->JMFS148B06-                                                                                   
     -------------------------------------->JMFS110B02-                                                               
                ---------------------->JMFS146E11-                                                                    
                ------------------>JMFS156C04-                                                                        
             --------------------->JMFS095G09-                                                                        
                                                                                                                                                                                                       ------------->JMFS072B07-  
                                                                                                                                            ----------------------------------->JMFN039P11-  
                                                                                                                           --------------------------------->JMFS054G07-  
                                                                                                                                                                               ---------------------------------->JMFN029B03-  
                                                                                                                                                                                --------------------------------->JMFN038C08-  
                                                                                                                                                                                                       ------------->JMFS084C05-  
                                                                                                                      ---------------------------------->JMFS048B02-