clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF039C20 | Sequence | 446 | 009550 (2) | emb|CDP06702.1| | 1e-21 | unnamed protein product [Coffea canephora] | 775 | 013182 (4) | ref|XP_011094705.1| | 5e-104 | PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic |
JMFS101D04 | Sequence | 617 | 013182 (4) | ref|XP_011094705.1| | 6e-113 | PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic | |||||
JMFS149C06 | Sequence | 618 | 013182 (4) | ref|XP_009622743.1| | 2e-70 | PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic | |||||
JMSF047N13 | Sequence | 655 | 009550 (2) | emb|CDP06702.1| | 3e-59 | unnamed protein product [Coffea canephora] | 682 | 013182 (4) | ref|XP_009622743.1| | 6e-90 | PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig009550============================================ 655 ============================================Contig013182============================================ 980 55 ------------------------------------------------------------------->JMFF039C20 <---------------------------------------------------------------------------rJMFF039C20 65 --------------------------------------------------------------------------------------------------->JMSF047N13 <---------------------------------------------------------------------rJMSF047N13 -------------------------------------------------------------->JMFS101D04- <--------------------------------------------------------------JMFS149C06-