| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF009E09 | Sequence | 569 | 003790 (15) | ref|XP_004170962.1| | 1e-103 | PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like | 673 | 003790 (15) | ref|XP_004170962.1| | 2e-125 | PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like |
| JMFS040C10 | Sequence | 627 | 003790 (15) | ref|XP_004170962.1| | 2e-117 | PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like | |||||
| JMFS157F03 | Sequence | 213 | 003790 (15) | emb|CBI30836.3| | 1e-22 | unnamed protein product [Vitis vinifera] | |||||
| JMSF009J03 | Sequence | 256 | 013343 (3) | ref|XP_011096520.1| | 2e-13 | PREDICTED: chlorophyll a-b binding protein 21, chloroplastic [Sesamum indicum] | 768 | 003790 (15) | ref|XP_008439658.1| | 7e-165 | PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] |
| JMSF012C16 | Sequence | 449 | 003790 (15) | ref|XP_004170962.1| | 1e-69 | PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like | 720 | 003790 (15) | ref|XP_004170962.1| | 4e-143 | PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like |
| JMSF021C17 | Sequence | 668 | 013343 (3) | ref|XP_004170962.1| | 9e-105 | PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like | 767 | 003790 (15) | ref|XP_004134603.1| | 4e-170 | PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like |
| JMSF036N24 | Sequence | 662 | 003790 (15) | ref|XP_011096520.1| | 4e-93 | PREDICTED: chlorophyll a-b binding protein 21, chloroplastic [Sesamum indicum] | 610 | 003790 (15) | gb|KCW73802.1| | 1e-79 | hypothetical protein EUGRSUZ_E02404 [Eucalyptus grandis] |
| JMSF037O04 | Sequence | 655 | 003790 (15) | ref|XP_011096520.1| | 1e-123 | PREDICTED: chlorophyll a-b binding protein 21, chloroplastic [Sesamum indicum] | 676 | 003790 (15) | gb|AFW81158.1| | 6e-136 | light harvesting chlorophyll a/b binding protein3 [Zea mays] |
| JMSF040C04 | Sequence | 656 | 003790 (15) | ref|XP_011096520.1| | 1e-123 | PREDICTED: chlorophyll a-b binding protein 21, chloroplastic [Sesamum indicum] | 855 | 003790 (15) | ref|XP_004170962.1| | 9e-175 | PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig013343============================================ 669 ============================================Contig003790============================================ 964 50 --------------------------------------------------------------------------------------------------->JMSF021C17 <-------------------------------------------------------------------------------rJMSF021C17 95 ------------------------------------->JMSF009J03 <-----------------------------------------------------------------------------rJMSF009J03 <---------------------rJMSF006H11* -------------------->JMFS157F03- -------------------------------------->JMSF036B22# ------------------------------------------------------------->JMFS040C10- <------------------------------------------------------------------------------rJMSF040C04** <---------------------------------------------------------------------rJMSF037O04** <--------------------------------------------------------------rJMSF036N24** ------------------------------------------------------------------->JMSF040C04** --------------------------------------------->JMSF012C16** ------------------------------------------------------------------->JMSF037O04** <----------------------------------------------------------------rJMSF012C16** ---------------------------------------------------------->JMFF009E09** -------------------------------------------------------------------->JMSF036N24** <--------------------------------------------------------rJMFF009E09**