List of clones in pair P002383.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF037K09Sequence633006639 (135)gb|KJB08271.1|8e-132hypothetical protein B456_001G074300 [Gossypium raimondii]834001435 (2)gb|ABN49455.1|9e-19photosystem I chlorophyll a/b binding protein [Pisum sativum]
JMSF050O12Sequence641006639 (135)gb|KJB08271.1|2e-132hypothetical protein B456_001G074300 [Gossypium raimondii]852001435 (2)gb|ABN49455.1|9e-19photosystem I chlorophyll a/b binding protein [Pisum sativum]

Contig 6639 BLAST Hits against nr-aa DB Show

Contig 1435 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig006639============================================1096         ============================================Contig001435============================================ 889
  16  --------------------------------------------------------->JMSF037K09                                                         <--------------------------------------------------------------------------------------rJMSF037K09  
  56   ---------------------------------------------------------->JMSF050O12                                          <-----------------------------------------------------------------------------------------------rJMSF050O12  
          --------------------------------------------------->JMFN011O05-                                             
         ------------------------------------------------------->JMFN032B14-                                          
                      <------------------------------------------------------------------rJMSF007M08*                 
                       <------------------------------------------------------------------rJMSF014D12#                
       ------------------------------------------------>JMFF051G14-                                                   
       ------------------------------------------------>JMFF019C23-                                                   
        -------------------------------------------------------->JMFN034J11-                                          
                                                                           <---------------rJMSF032O16-               
        -------------------------->JMFN015F22-                                                                        
                                                  ---------------------------------------------->JMFN035B21-          
                     <----------------------------------------------------------------rJMSF040B18-                    
                      ------------------------------------------------------>JMFN033C03-                              
                     <--------------------------------------------------------------------rJMSF014I18*                
       --------------------------------------------------------->JMFN010C23-                                          
                            <-------------------------------------------------------------rJMSF050L05#                
                               <------------------------------------------------------------------rJMSF013A09*        
                                                         -------------------->JMFN004D05-                             
        ----------------------------------------->JMFS023F06-                                                         
                          ------------------------------------------------------>JMFN017O04-                          
        -------------------------------------------------------->JMFN010G11-                                          
                             <----------------------------------------------------------------rJMFF026B04-            
                                       ----------------------------------------------------->JMFN034D04-              
         ------------------------------------------------------>JMFN043B06-                                           

      --------------------------------------------->JMFF033D03**
                              <----------------------------------------------------------------rJMFF011A02**
      --------------------------------------------->JMSF018M11**
                                           <--------------------------------------------------rJMFF047F11**
                            <-------------------------------------------------------------rJMSF011M24**
      ------------------------------------>JMFF005A13**
      -------------------------------------------------------->JMFF043L24**
                                      <--------------------------------------------------------rJMFF008J02**
                                                               <-------------------------rJMFF022G02**
      ----------------------->JMSF014E03**
      -------------------------------------->JMSF019C08**
      --------------------------------------------->JMFF022G02**
                                                               <-----------------------------rJMFF016N21**
                          <------------------------------------------------------------------rJMFF029P14**
      ------------------------------------------------>JMFF012D22**
      ---------------------------------------------->JMFF010J04**
        ----------------------------------------------------->JMFF043E18**
      -------------------------------------------------->JMFF001K19**
                             <--------------------------------------------------------------rJMFF027D15**
                                                       <----------------------------------------rJMFF049J16**
      ---------------------------------------------------------->JMSF020C04**
                   <----------------------------------------------------------------------rJMSF014E03**
      ---------------------------------------------------------->JMSF025D02**
                               <-------------------------------------------------------------rJMFF037E01**
                            <-----------------------------------------------------------------------rJMFF012D22**
                                                <---------------------------------------------rJMFF049N24**
     ---------------------------------------------------------->JMFF045L06**
                     <--------------------------------------------------------------------rJMSF018M11**
                             <----------------------------------------------------------------------rJMFF007D09**
      -------------------------------------------->JMFF017I07**
      ----------------------------------------------------->JMSF017G10**
      -------------------------------------------------------->JMFF042P01**
      --------------------------------------------->JMFF008J02**
                                                <---------------------------------------------rJMFF043E18**
                                          <------------------------------------------------------rJMFF044G12**
      -------------------------------------------------------->JMFF049N24**
                        <----------------------------------------------------------------rJMSF037G12**
                                <------------------------------------------------------------------rJMSF026P20**
      --------------------------------------------------->JMSF012I14**
      ----------------------------------->JMSF018C15**
                         <-----------------------------------------------------------------rJMSF016I08**
      -------------------------------------------------------->JMFF050O20**
                     <--------------------------------------------------------------------rJMSF017I11**
      ------------------------------------------------------>JMFF050O17**
      --------------------------------------------------------->JMSF051A04**
                              <---------------------------------------------------------------rJMFF017I07**
                            <----------------------------------------------------------------rJMFF017J15**
     -------------------------------------->JMFF016N21**
      ----------------------------------------------------->JMFF017J15**
                            <-----------------------------------------------------------------rJMFF033D03**
                            <----------------------------------------------------------------rJMFF012D01**
         ----------------------------------------------------->JMFF012N10**
        ------------------------------------------------------->JMFF039J04**
       ------------------------->JMSF011M24**
      ---------------------->JMSF016I08**
                                 <-------------------------------------------------------rJMFF001K19**
      --------------------------------------------------------->JMFF007D09**
      -------------------------------------------->JMFF037E01**
                                <------------------------------------------------------------------rJMSF032C14**
       ------------------------->JMSF008G21**
             <-----------------------------------------------------------------------------rJMSF039B18**
                                          <---------------------------------------------------rJMFF050O17**
      -------------------------------------------->JMFF012D01**
                                                        <-------------------------------------rJMFF047O05**
                     <--------------------------------------------------------------------rJMSF017G10**
        -------------------------------------------------------->JMFF049J16**
                      <-------------------------------------------------------------------rJMSF019C08**
      ---------------------------------------------------------->JMSF036N06**
     ------------------------------------------------------------>JMSF032C14**
     ----------------------------------------------------------->JMSF039B18**
                            <-------------------------------------------------------------rJMSF012I14**
                          <-------------------------------------------------------------------rJMFF012N10**
        ------------------------------------------------------->JMFF044G12**
     ---------------------------------------------->JMFF039I14**
                      <--------------------------------------------------------------------rJMSF018C15**
                              <---------------------------------------------------------------rJMFF010J04**
      ---------------------->JMSF007E15**
      --------------------------------------------->JMFF016C23**
                                                     <------------------------------------------------rJMFF042P01**
       ------------------------------------------------>JMFF011A02**
      ---------------------------------------------------------->JMSF026P20**
                             <-------------------------------------------------------------------rJMFF021P03**
      ---------------------------------------------->JMFF027D15**
                        <----------------------------------------------------------------rJMSF044O19**
      ----------------------------------------->JMFF029P14**
                                                    <----------------------------------------------------rJMFF050O20**
        --------------------------------------------------------->JMSF044O19**
                              <-----------------------------------------------------------rJMSF036N06**
      --------------------------------------------->JMFF047O05**
                     <----------------------------------------------------------------------rJMFF016C23**
      ---------------------------------------------------------->JMSF020C07**
                              <--------------------------------------------------------------rJMSF051A04**
      --------------------------------------------->JMFF021P03**
                             <----------------------------------------------------------------rJMFF039J04**
                              <----------------------------------------------------------------rJMFF032J21**
                                <------------------------------------------------------------rJMFF014N01**
                     <--------------------------------------------------------------------rJMSF020C04**
      --------------------------------------------------------->JMFF047F11**
      --------------------------------------------------------->JMFF032J21**
                            <-------------------------------------------------------------rJMSF008G21**
                               <------------------------------------------------------------------rJMSF025D02**
                                              <------------------------------------------------rJMFF045L06**
                            <----------------------------------------------------------------rJMFF039I14**
      --------------------------------------------------->JMFF014N01**
                                    <---------------------------------------------------------rJMFF005A13**
                             <--------------------------------------------------------------------rJMSF020C07**
      --------------------------------------------->JMSF017I11**
                                                     <------------------------------------------rJMFF043L24**
                     <--------------------------------------------------------------------rJMSF007E15**
        -------------------------------------------------------->JMSF037G12**