clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF016G13 | Sequence | 513 | 007991 (3) | ref|XP_009789753.1| | 3e-25 | PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic | 789 | 002818 (3) | ref|XP_009608074.1| | 3e-81 | PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic |
JMSF017G13 | Sequence | 756 | 002818 (3) | ref|XP_009608074.1| | 3e-72 | PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic | |||||
JMSF023L03 | Sequence | 636 | 007991 (3) | ref|XP_009789753.1| | 4e-25 | PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic | |||||
JMSF038K16 | Sequence | 671 | 007991 (3) | ref|XP_009608074.1| | 5e-29 | PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic | 892 | 002818 (3) | ref|XP_009608074.1| | 5e-138 | PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig007991============================================ 671 ============================================Contig002818============================================1043 7 --------------------------------------------------------------------------->JMSF016G13 <---------------------------------------------------------------------------rJMSF016G13 153 --------------------------------------------------------------------------------------------------->JMSF038K16 <-------------------------------------------------------------------------------------rJMSF038K16 -------------------------------------------------------------------------------------------->JMSF023L03- <-----------------------------------------------------------------------rJMSF017G13-