List of clones in pair P001952.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036O10Sequence510011538 (48)gb|KJB11482.1|2e-80hypothetical protein B456_001G261400 [Gossypium raimondii]651001249 (7)ref|XP_009803257.1|2e-36PREDICTED: zinc finger CCCH domain-containing protein 43-like isoform X1 [Nicot
JMFF051D20Sequence569011538 (48)gb|KJB11482.1|7e-97hypothetical protein B456_001G261400 [Gossypium raimondii]559001249 (7)ref|XP_009803257.1|6e-18PREDICTED: zinc finger CCCH domain-containing protein 43-like isoform X1 [Nicot

Contig 11538 BLAST Hits against nr-aa DB Show

Contig 1249 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig011538============================================1450         ============================================Contig001249============================================ 796
  59     -------------------------------------->JMFF051D20                                                                                          <---------------------------------------------------------------------rJMFF051D20  
  70     ---------------------------------->JMFF036O10                                                                                <---------------------------------------------------------------------------------rJMFF036O10  
         ---------------------------------->JMFF031F02-                                                               
          ------------------------------------------>JMFN014A01-                                                      
                                                                  ------------------------------------>JMFN018K09-    
         -------------------------------------->JMFF037D06-                                                           
                                                                                                                                            <--------------------------------------------------------------------------rJMFF034C14- 
                                                                                                                      <---------------------------------------------------------------------------------------------rJMSF019K13* 
                                                                                                                                                   --------------------------------------------------------------------->JMFN010O17-  
                                                                                                                                                          <--------------------------------------------------------rJMSF052J13* 
                                                                                                                                  <-------------------------------------------------------------------------------------rJMFF037G07- 
                                                                 <---------------------------------------rJMFF041E03**
                                                          <-------------------------------------------rJMFF016B07**
         -------------------------------------->JMFF039J16**
         ---------------------->JMSF016O10**
                                                <-------------------------------------------------------rJMFF006N03**
         ---------------------------------->JMFF024K17**
                                                      <-----------------------------------------------rJMFF012L18**
                                                              <-----------------------------------------rJMFF045M14**
         ---------------------------------->JMFF013K05**
                                                <-------------------------------------------------------rJMFF002M08**
                                                       <----------------------------------------------rJMFF024K17**
         --------------------------------------->JMFF026E03**
         --------------------------------------->JMFF010N01**
                                                    <----------------------------------------------------rJMFF020E01**
         ----------------------------------------->JMFF045D08**
         -------------------------------------->JMFF045H18**
         -------------------------------------->JMFF002M08**
                                                                     <----------------------------------rJMFF045H18**
                                                      <-----------------------------------------------rJMFF010N01**
     ------------------------------------->JMFF021C15**
                                                                        <--------------------------rJMFF045D08**
                                         -------------------------------------------->JMFF045M14**
         ---------------------------------->JMFF030C09**
         ------------------------------------------>JMFF044O23**
                                                           <------------------------------------------rJMFF021C15**
                                                               <----------------------------------------rJMFF044O23**
                                                    <--------------------------------------------------rJMFF029C07**
                                                    <----------------------------------------------------rJMFF026E03**
                                                                             <---------rJMFF013K05**
                                                  <--------------------------------------------------rJMSF016O10**
         ----------------------------->JMFF029C07**
         ---------------------------------->JMFF033N20**
         ---------------------------------->JMFF012L18**
         -------------------------------------->JMFF016B07**
         --------------------------------------->JMFF006N03**
         -------------------------------------->JMFF020E01**
                                                     <------------------------------------------------rJMFF033N20**
                                                     <------------------------------------------------rJMFF008E23**
                                                           <--------------------------------------------rJMFF039J16**
         ------------------------------------------>JMFF008E23**
         -------------------------------------------->JMFF041E03**
                                                     <-----------------------------------------------rJMFF030C09**