List of clones in pair P001911.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031E10Sequence477013068 (3)ref|XP_009613181.1|79.7PREDICTED: uncharacterized protein LOC104106355 [Nicotiana tomentosiformis]693004835 (186)sp|P04715.1|RBS2_PETHY3e-92RecName: Full=Ribulose bisphosphate carboxylase small chain SSU11A, chloroplast
JMSF037F13Sequence533013068 (3)ref|XP_009613181.1|79.3PREDICTED: uncharacterized protein LOC104106355 [Nicotiana tomentosiformis]691004835 (186)sp|P04715.1|RBS2_PETHY4e-92RecName: Full=Ribulose bisphosphate carboxylase small chain SSU11A, chloroplast

Contig 13068 BLAST Hits against nr-aa DB Show

Contig 4835 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig013068============================================ 608         ============================================Contig004835============================================ 997
 448                                                  --------------------------------------------------->JMSF031E10                  <---------------------------------------------------------------------rJMSF031E10  
 449                                                  --------------------------------------------->JMSF037F13                      <---------------------------------------------------------------------rJMSF037F13  
     <----------------------------------------------------------------------------------------------JMFN046G13-       
                                                                                                                                    ------------------------------------------------------------->JMFN029L20-  
                                                                                                                                                   <-----------------------------------------------------------JMFN035M13-  
                                                                                                                                  --------------------------------------------->JMSF006H10-  
                                                                                                                                    ------------------------------------------------------------->JMFN011O10-  
                                                                                                                                       ----------------------------->JMFN028J06-  
                                                                                                                                           ---------------------------------------------------------------->JMFN003L19-  
                                                                                                                                          -------------------------------------------------------------->JMFN038O04-  
                                                                                                                                                                                 <----------------rJMFF020O01- 
                                                                                                                                  <----------------------------------------------------------------------rJMSF044G04# 
                                                                                                                                    <------------------------------------------------------------JMSF039O13*  
                                                                                                                                      ------------------------------------------------------------->JMFN019D08-  
                                                                                                                                    -------------------------------------------------------------->JMFN015F07-  
                                                                                                                      ----------------------------------------------------------->JMFS097A04-  
                                                                                                                                     -------------------------------------------------------------->JMFN043G17-  
                                                                                                                                      --------------------------------------------------->JMFN046J18-  
                                                                                                                                      -------------------------------------------------------------->JMFN039H16-  
                                                                                                                                     -------------------------------------------------------------->JMFN003L11-  
                                                                                                                                      -------------------------------------------------------------->JMFN004D18-  
                                                                                                                                            <---------------------------------------------------------rJMSF006H12# 
                                                                                                                                  ----------------------------->JMSF005C17-  
                                                                                                                                       ---------------------------------------------------------------->JMFN020F09-  
                                                                                                                                     --------------------------------------------------------------->JMFN014P18-  
                                                                                                                                     -------------------------------------------------------------->JMFN015K19-  
                                                                                                                                    ---------------------------------------------------------------->JMFN033H22-  
                                                                                                                                         ----------------------------------->JMFN028H10-  
                                                                                                                                      --------------->JMFN030D12-  
                                                                                                                                      ------------------------------------------------>JMFN028M12-  
                                                                                                                                      -------------------------------------------------------------->JMFN030E16-  
                                                                                                                                    -------------------------------------------------------------->JMFN025C24-  
                                                                                                                                      ------------------------------------------------------------->JMFN004I21-  
                                                                                                                                     ---------------------------------------------------------------->JMFN031H21-  
                                                                                                                                                           --------------------------------------------------->JMFN016L16-  
                                                                                                                                          --------------------------------------------------------------->JMFN004O16-  
                                                                                                                                    --------------------------------------------------------------->JMFN008O03-  
                                                                                                                                                               ---------------------------------------------->JMFN035C01-  
                                                                                                                                                                <------------------------------------------rJMSF005C19- 
                                                                                                                                     --------------------------------------------------------------->JMFN040E09-  
                                                                                                                                     --------------------------------------------------------------->JMFN038A18-  
                                                                                                                                      ---------------------------------------------------------------->JMFN019O10-  
                                                                                                                                      --------------------------------------------------------------->JMFN016G01-  
                                                                                                                                      -------------------------------------------------------------->JMFN015J13-  
                                                                                                                                    ---------------------------------------------------------------->JMFN011E22-  
                                                                                                                                     --------------------------------------------------->JMFN002G11-  
                                                                                                                                          ------------------------------------------------------------->JMFN040F16-  
                                                                                                                                     ----------------------------------------------------------->JMFN039D12-  
                                                                                                                                     ------------------------------------------------------------->JMFN011E08-  
                                                                                                                                   --------------------------------------------------------------->JMFF016K14-  
                                                                                                                                     ------------------------------------------------------------->JMFN039E16-  
                                                                                                                                     --------------------------------------------------------------->JMFN003P17-  
                                                                                                                                     -------------------------------------------------------->JMFN008G07-  
                                                                                                                                                            ------------------------------------------------->JMFN005F15-  
                                                                                                                                     -------------------------------------------------------->JMFS036B10-  
                                                                                                                                    ---------------------------------------------------------------->JMFN035O07-  
                                                                                                                                     -------------------------------------------->JMFN042J10-  
                                                                                                                                     --------------------------------------------------------->JMFN011H13-  
                                                                                                                                      ------------------------------------------------------------->JMFN011D02-  
                                                                                                                                     ------------------------------------------------------------->JMFN016F09-  
                                                                                                                                     --------------------------------------------------->JMFN033G13-  
                                                                                                                                                                                     ------------------------->JMFN004M08-  
                                                                                                                                     --------------------------------------------------------------->JMFN042J11-  
                                                                                                                                                                 -------------------------------------------->JMFN009E07-  
                                                                                                                                     ------------------------------------------------------------->JMFN016A16-  
                                                                                                                                    -------------------------------------------------------------->JMFN015N23-  
                                                                                                                                     ------------------------------------------------------------->JMFN038C17-  
                                                                                                                                     -------------------------------------------------------------->JMFN009K18-  
                                                                                                                                     -------------------------------------------------------------->JMFN019E13-  
                                                                                                                      -------------------------------------------------------------->JMFS100G06-  
                                                                                                                                     --------------------------------------------------------------->JMFN018C05-  
                                                                                                                                    ---------------------------------------------------->JMFN001D01-  
                                                                                                                                     -------------------------------------------------------------->JMFN046A08-  
                                                                                                                                      ---------------------------------------------------------------->JMFN006I12-  
                                                                                                                                      ---------------------------------------------------------------->JMFN028P07-  
                                                                                                                                                          --------------------------------------------------->JMFN004E21-  
                                                                                                                                    --------------------------------------------------------------->JMFN008P04-  
                                                                                                                                      ---------------------------------------------------------------->JMFN033N11-  
                                                                                                                                    -------------------------------------------------------------->JMFN007B02-  
                                                                                                                                     ------------------------------------------------------------->JMFN018B02-  
                                                                                                                                    --------------------------------------------------------------->JMFN032G08-  
                                                                                                                                      ----------------------------------------------------------------->JMFN025K18-  
                                                                                                                                         ---------------------------------------------------------------->JMFN008B24-  
                                                                                                                                     -------------------------------------------------------------->JMFN008J16-  
                                                                                                                                                             -------------------------------------------------->JMFS050F10-  
                                                                                                                                     ------------------------------------------------------------->JMFN015B04-  
                                                                                                                                     ----------------------------------------------------------------->JMFN033N15-  
                                                                                                                                     --------------------------------------------------->JMFN025K16-  
                                                                                                                                      ----------------------------------------------------------->JMFN003I19-  
                                                                                                                                     ---------------------------------------------------------->JMFN036P01-  
                                                                                                                                     ------------------------------------------------------------>JMFN009I01-  
                                                                                                                                     -------------------------------------------------------------->JMFN005B03-  
                                                                                                                                                    <---------------------------------------------------------JMFN042M08-  
                                                                                                                                     ------------------------------------------------------------->JMFN038P11-  
                                                                                                                                     ------------------------------------------------------------->JMFN037P21-  
                                                                                                                                     -------------------------------------------------------------->JMFN040H12-  
                                                                                                                                      ------------------------------------------------------------->JMFN038H15-  
                                                                                                                                      ---------------------------------------------------------------->JMFN031C21-  
                                                                                                                                     --------------------------------------------------------------->JMFN041J04-  
                                                                                                                                     ------------------------------------------------------->JMFN004G04-  
                                                                                                                                          ---------------------------------------------------------------->JMFN007G17-  
                                                                                                                                                             <------------------------------------------------------------JMFN034H06-  
                                                                                                                                     ----------------------------------------------------------->JMFN020M01-  
                                                                                                                                     ----------------------------------------------------->JMFS160H07-  
                                                                                                                                      --------------------------------------------------------------->JMFN025E19-  
                                                                                                                                     -------------------------------------------------------------->JMFN025I18-  
                                                                                                                                       --------------------------------------------------------------->JMFN015N15-  
                                                                                                                                   <------------------------------------------------------------rJMFF023P10- 
                                                                                                                                         <------------------------------------------------------------------rJMFF023C22- 
                                                                                                                                     --------------------------------------------------------------->JMFN039L12-  
                                                                                                                                       ---------------------------------------------------------------->JMFN014J22-  
                                                                                                                                     ------------------------------------------------------------->JMFN016M10-  
                                                                                                                                         <-------------------------------------------------------------------rJMSF028D05* 
                                                                                                                                     -------------------------------------------------------------->JMFN004P04-  
                                                                                                                                     --------------------------------------------------------------->JMFN016P02-  
                                                                                                                                      ------------------------------------------------------------>JMFN029L04-  
                                                                                                                                                        ----------------------------------------------------->JMFN004N06-  
                                                                                                                                       ----------------------------------------------------------------->JMFN025H08-  
                                                                                                                                    --------------------------------------------------------------->JMFN009G13-  
                                                                                                                                          -------------------------------------------------------------->JMFN025D20-  
                                                                                                                                     -------------------------------------------------------------->JMFN034F06-  
                                                                                                                                  ------------------------------------------------------------------->JMSF051P07**
                                                                                                                                  ------------------------------------------------------------->JMFF008D15**
                                                                                                                                  ---------------------->JMSF011P07**
                                                                                                                                  <-----------------------------------------------------------------------rJMSF016J17**
                                                                                                                                  <-------------------------------------------------------------------rJMSF016D23**
                                                                                                                                         <----------------------------------------------------------------rJMFF028L01**
                                                                                                                                   <------------------------------------------------------------rJMFF022K10**
                                                                                                                                  -------------------------------->JMSF003N03**
                                                                                                                                  <-------------------------------------------------------------------rJMSF022L22**
                                                                                                                                    <---------------------------------------------------------------------rJMSF029H18**
                                                                                                                                    -------------------------------------------->JMSF006L10**
                                                                                                                                         <-----------------------------------------------------------------rJMSF011P07**
                                                                                                                                                                                        ---------------------->JMFF032I12**
                                                                                                                                                   <---------------------------------------------------------rJMFF043O24**
                                                                                                                                         <-------------------------------------------------------------rJMSF029D04**
                                                                                                                                   <-------------------------------------------------------------------rJMSF049G13**
                                                                                                                                         <-----------------------------------------------------------------rJMSF010G13**
                                                                                                                                   ---------------------------------------->JMSF016C06**
                                                                                                                                   ----------------------------------------------------------------------->JMSF039L23**
                                                                                                                                   -------------------------------------------------------------------->JMSF029D04**
                                                                                                                                  <-----------------------------------------------------------------------rJMSF051P07**
                                                                                                                                   --------------------------------------------------------->JMFF028L01**
                                                                                                                                   ---------------------------------------------->JMFF022M24**
                                                                                                                                   ---------------------------------------------------------------->JMFF043G15**
                                                                                                                                  <-----------------------------------------------------------------------rJMSF016M12**
                                                                                                                                   -------------------------------------------------------------------->JMSF040L23**
                                                                                                                                         <-------------------------------------------------------------rJMSF031M19**
                                                                                                                                         <-----------------------------------------------------------------rJMSF003N03**
                                                                                                                                   -------------------------------------------------------->JMSF013I05**
                                                                                                                                   <----------------------------------------------------------------------rJMFF022M24**
                                                                                                                                   <-----------------------------------------------------------------------rJMSF039L23**
                                                                                                                                  --------------------------------------------------------------------->JMSF046O15**
                                                                                                                                    --------------------------------------------------------------------->JMSF028A12**
                                                                                                                                                      <---------------------------------------------------rJMSF006L10**
                                                                                                                                   <------------------------------------------------------------------------rJMSF040L23**
                                                                                                                                  ------------------------>JMSF016D23**
                                                                                                                                  ----------------------------------------->JMSF013P01**
                                                                                                                                  <-----------------------------------------------------------------------rJMSF051L03**
                                                                                                                                         <-----------------------------------------------------------------rJMFF027F21**
                                                                                                                                                                                        <--------------------rJMFF032I12**
                                                                                                                                         <------------------------------------------------------------------rJMFF002H16**
                                                                                                                                   <-------------------------------------------------------------------rJMSF016H24**
                                                                                                                                            <--------------------------------------------------------------rJMSF046O15**
                                                                                                                                  ----------------------------------------------------------------->JMSF022L22**
                                                                                                                                   <---------------------------------------------------------------------rJMSF016C06**
                                                                                                                                   -------------------------------------------------------------------------->JMSF042N10**
                                                                                                                                         <----------------------------------------------------------------rJMSF013I05**
                                                                                                                                  ---------------------------------------------------------->JMSF029H18**
                                                                                                                                  ------------------------------------------------>JMSF016M12**
                                                                                                                                  ------------------------------------------------------------->JMSF051L03**
                                                                                                                                  ----------------------------------------------->JMSF016J17**
                                                                                                                                   ---------------------------------------------------->JMFF027F21**
                                                                                                                                    <-------------------------------------------------------------------rJMSF028A12**
                                                                                                                                   ------------------------------------------------->JMFF022K10**
                                                                                                                                   ------------------------>JMSF016H24**
                                                                                                                                  ------------------------------------------------------------->JMSF031M19**
                                                                                                                                   ---------------------------------------------------->JMFF002H16**
                                                                                                                                                  <---------------------------------------------------------rJMFF043G15**
                                                                                                                                         <-----------------------------------------------------------------rJMSF042N10**
                                                                                                                                   ----------------------------------------------->JMSF016N22**
                                                                                                                                   ---------------------------------------------------------------->JMFF043O24**
                                                                                                                                  --------------------------------------------->JMSF010G13**
                                                                                                                                         <------------------------------------------------------------------rJMSF013P01**
                                                                                                                                   ----------------------------------------------------------------------->JMSF049G13**
                                                                                                                                                                                            <---------rJMFF008D15**
                                                                                                                                         <-----------------------------------------------------------------rJMSF016N22**