| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMSF031E10 | Sequence | 477 | 013068 (3) | ref|XP_009613181.1| | 79.7 | PREDICTED: uncharacterized protein LOC104106355 [Nicotiana tomentosiformis] | 693 | 004835 (186) | sp|P04715.1|RBS2_PETHY | 3e-92 | RecName: Full=Ribulose bisphosphate carboxylase small chain SSU11A, chloroplast |
| JMSF037F13 | Sequence | 533 | 013068 (3) | ref|XP_009613181.1| | 79.3 | PREDICTED: uncharacterized protein LOC104106355 [Nicotiana tomentosiformis] | 691 | 004835 (186) | sp|P04715.1|RBS2_PETHY | 4e-92 | RecName: Full=Ribulose bisphosphate carboxylase small chain SSU11A, chloroplast |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig013068============================================ 608 ============================================Contig004835============================================ 997 448 --------------------------------------------------->JMSF031E10 <---------------------------------------------------------------------rJMSF031E10 449 --------------------------------------------->JMSF037F13 <---------------------------------------------------------------------rJMSF037F13 <----------------------------------------------------------------------------------------------JMFN046G13- -------------------------------------------------------------->JMFN043G17- -------------------------------------------------------------->JMFN034F06- <------------------------------------------------------------rJMFF023P10- --------------------------------------------------------------->JMFN004O16- -------------------------------------------------------------->JMFN019E13- -------------------------------------------------------------->JMFN015F07- -------------------------------------------------------------->JMFN040H12- -------------------------------------------------------------->JMFN039H16- --------------------------------------------------->JMFN002G11- ----------------------------------------------------->JMFN004N06- ------------------------------------------------------------>JMFN029L04- --------------------------------------------------------->JMFN011H13- ------------------------------------------------------------->JMFN016M10- ------------------------------------------------------------->JMFN019D08- ------------------------------------------------------------->JMFN004I21- --------------------------------------------------------------->JMFN008O03- -------------------------------------------------------------->JMFN015J13- ---------------------------------------------------------------->JMFN003L19- --------------------------------------------------------------->JMFN041J04- ------------------------------------------------------->JMFN004G04- ---------------------------------------------------------------->JMFN035O07- ------------------------------------------------>JMFN028M12- --------------------------------------------------------------->JMFN032G08- ------------------------------------------------->JMFN005F15- ------------------------------------------------------------->JMFN038P11- -------------------------------------------------------------->JMFN025I18- ----------------------------------->JMFN028H10- ----------------------------------------------------------->JMFN020M01- -------------------------------------------------------------->JMFN025D20- ------------------------------------------------------------->JMFN037P21- -------------------------------------------------------------->JMFN008J16- --------------------------------------------------------------->JMFN038A18- --------------------------------------------------------------->JMFN016P02- ------------------------------------------------------------>JMFN009I01- --------------------------------------------------------------->JMFN003P17- <---------------------------------------------------------JMFN042M08- ---------------------------------------------------------------->JMFN031H21- ------------------------------------------------------------->JMFN011O10- -------------------------------------------------------------->JMFN004P04- -------------------------------------------------------------->JMFN046A08- ----------------------------------------------------------->JMFN039D12- ---------------------------------------------------------->JMFN036P01- -------------------------------------------------------------->JMFN030E16- ---------------------------------------------------------------->JMFN008B24- <------------------------------------------------------------JMFN034H06- -------------------------------------------------------------->JMFN009K18- <------------------------------------------------------------JMSF039O13* <------------------------------------------------------------------rJMFF023C22- ---------------------------------------------------------------->JMFN014J22- --------------------------------------------------------------->JMFN040E09- ---------------------------------------------------------------->JMFN031C21- ----------------------------->JMFN028J06- -------------------------------------------------------------->JMFN025C24- ----------------------------------------------------------------->JMFN033N15- ----------------------------------------------------------------->JMFN025K18- --------------------------------------------------------------->JMFN016G01- -------------------------------------------------------------->JMFN004D18- --------------------------------------------------------------->JMFN015N15- --------------------------------------------------->JMFN004E21- -------------------------------------------------------------->JMFN005B03- <------------------------------------------rJMSF005C19- --------------------------------------------------------------->JMFN042J11- -------------------------------------------------------------->JMFN007B02- ---------------------------------------------------------------->JMFN020F09- ------------------------------------------------------------->JMFN016A16- --------------------------------------------------------------->JMFN014P18- --------------------------------------------------->JMFN033G13- ---------------------------------------------------->JMFN001D01- ------------------------------------------------------------->JMFN040F16- --------------------------------------------------->JMFN046J18- ------------------------------------------------------------->JMFN038H15- ---------------------------------------------------------------->JMFN033N11- <----------------rJMFF020O01- -------------------------------------------------------------->JMFN015N23- ---------------------------------------------------------------->JMFN006I12- --------------------------------------------------->JMFN025K16- ---------------------------------------------------------------->JMFN019O10- ----------------------------------------------------------------->JMFN025H08- ------------------------------------------------------------->JMFN038C17- ----------------------------------------------------------->JMFN003I19- ------------------------------------------------------------->JMFN011E08- --------------------------------------------------------------->JMFF016K14- -------------------------------------------------------------->JMFN015K19- ---------------------------------------------------------------->JMFN011E22- ----------------------------->JMSF005C17- ------------------------------------------------------------->JMFN018B02- ------------------------------------------------------------->JMFN016F09- -------------------------------------------------------------->JMFN003L11- ---------------------------------------------------------------->JMFN033H22- -------------------------------------------->JMFN009E07- -------------------------------------------------------------->JMFS100G06- ----------------------------------------------------------->JMFS097A04- ------------------------------------------------------------->JMFN011D02- ------------------------->JMFN004M08- --------------------------------------------------------------->JMFN018C05- <-----------------------------------------------------------JMFN035M13- -------------------------------------------->JMFN042J10- --------------------------------------------------------------->JMFN025E19- -------------------------------------------------->JMFS050F10- -------------------------------------------------------->JMFS036B10- ---------------------------------------------->JMFN035C01- <-------------------------------------------------------------------rJMSF028D05* <----------------------------------------------------------------------rJMSF044G04# <---------------------------------------------------------rJMSF006H12# --------------------------------------------------------------->JMFN009G13- --------------------------------------------------------------->JMFN039L12- ------------------------------------------------------------->JMFN015B04- -------------------------------------------------------->JMFN008G07- -------------------------------------------------------------->JMFN038O04- --------------------------------------------------------------->JMFN008P04- --------------->JMFN030D12- ------------------------------------------------------------->JMFN039E16- ------------------------------------------------------------->JMFN029L20- --------------------------------------------->JMSF006H10- ---------------------------------------------------------------->JMFN028P07- --------------------------------------------------->JMFN016L16- ----------------------------------------------------->JMFS160H07- ---------------------------------------------------------------->JMFN007G17- <-----------------------------------------------------------------------rJMSF051L03** <------------------------------------------------------------------rJMFF002H16** <-------------------------------------------------------------rJMSF029D04** <------------------------------------------------------------------rJMSF013P01** ---------------------------------------------------->JMFF027F21** ------------------------------------------------------------->JMSF051L03** <-------------------------------------------------------------------rJMSF049G13** -------------------------------------------------------------------->JMSF040L23** -------------------------------------------------------------------------->JMSF042N10** --------------------------------------------------------------------->JMSF028A12** <---------rJMFF008D15** ---------------------->JMFF032I12** <-----------------------------------------------------------------rJMSF003N03** -------------------------------->JMSF003N03** ---------------------------------------------------------->JMSF029H18** <-----------------------------------------------------------------rJMFF027F21** <---------------------------------------------------------------------rJMSF029H18** <--------------------------------------------------------------rJMSF046O15** <---------------------------------------------------rJMSF006L10** ------------------------>JMSF016H24** <---------------------------------------------------------rJMFF043G15** ---------------------------------------->JMSF016C06** ------------------------------------------------------------------->JMSF051P07** <-------------------------------------------------------------rJMSF031M19** <--------------------rJMFF032I12** <-----------------------------------------------------------------------rJMSF016J17** ---------------------------------------------------------------->JMFF043G15** ----------------------------------------------------------------------->JMSF049G13** --------------------------------------------->JMSF010G13** <------------------------------------------------------------rJMFF022K10** ---------------------------------------------------->JMFF002H16** <---------------------------------------------------------rJMFF043O24** ------------------------>JMSF016D23** <------------------------------------------------------------------------rJMSF040L23** <-------------------------------------------------------------------rJMSF016D23** -------------------------------------------------------------------->JMSF029D04** ----------------------------------------------------------------------->JMSF039L23** ---------------------->JMSF011P07** -------------------------------------------------------->JMSF013I05** --------------------------------------------------------->JMFF028L01** <-----------------------------------------------------------------rJMSF042N10** ---------------------------------------------->JMFF022M24** -------------------------------------------->JMSF006L10** ----------------------------------------------->JMSF016N22** <-------------------------------------------------------------------rJMSF016H24** ---------------------------------------------------------------->JMFF043O24** ----------------------------------------------->JMSF016J17** ----------------------------------------->JMSF013P01** ----------------------------------------------------------------->JMSF022L22** <----------------------------------------------------------------------rJMFF022M24** <-------------------------------------------------------------------rJMSF028A12** ------------------------------------------------->JMFF022K10** ------------------------------------------------>JMSF016M12** <----------------------------------------------------------------rJMSF013I05** <-------------------------------------------------------------------rJMSF022L22** <-----------------------------------------------------------------------rJMSF039L23** <-----------------------------------------------------------------rJMSF016N22** ------------------------------------------------------------->JMSF031M19** <-----------------------------------------------------------------------rJMSF016M12** <---------------------------------------------------------------------rJMSF016C06** <----------------------------------------------------------------rJMFF028L01** --------------------------------------------------------------------->JMSF046O15** <-----------------------------------------------------------------------rJMSF051P07** ------------------------------------------------------------->JMFF008D15** <-----------------------------------------------------------------rJMSF010G13** <-----------------------------------------------------------------rJMSF011P07**