| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMSF031E10 | Sequence | 477 | 013068 (3) | ref|XP_009613181.1| | 79.7 | PREDICTED: uncharacterized protein LOC104106355 [Nicotiana tomentosiformis] | 693 | 004835 (186) | sp|P04715.1|RBS2_PETHY | 3e-92 | RecName: Full=Ribulose bisphosphate carboxylase small chain SSU11A, chloroplast |
| JMSF037F13 | Sequence | 533 | 013068 (3) | ref|XP_009613181.1| | 79.3 | PREDICTED: uncharacterized protein LOC104106355 [Nicotiana tomentosiformis] | 691 | 004835 (186) | sp|P04715.1|RBS2_PETHY | 4e-92 | RecName: Full=Ribulose bisphosphate carboxylase small chain SSU11A, chloroplast |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig013068============================================ 608 ============================================Contig004835============================================ 997 448 --------------------------------------------------->JMSF031E10 <---------------------------------------------------------------------rJMSF031E10 449 --------------------------------------------->JMSF037F13 <---------------------------------------------------------------------rJMSF037F13 <----------------------------------------------------------------------------------------------JMFN046G13- ---------------------------------------------------------------->JMFN019O10- ----------------------------------------------------->JMFN004N06- -------------------------------------------------------------->JMFN015N23- <------------------------------------------------------------JMSF039O13* ---------------------------------------------------------------->JMFN008B24- ----------------------------------------------------------->JMFN003I19- ------------------------------------------------->JMFN005F15- <---------------------------------------------------------rJMSF006H12# ------------------------------------------------------------->JMFN016M10- <---------------------------------------------------------JMFN042M08- -------------------------------------------------------------->JMFN043G17- --------------->JMFN030D12- <-----------------------------------------------------------JMFN035M13- ---------------------------------------------------------------->JMFN006I12- ------------------------------------------------------------->JMFN039E16- ------------------------------------------------------------->JMFN029L20- -------------------------------------------------------------->JMFN034F06- ---------------------------------------------------------------->JMFN011E22- ------------------------------------------------------------->JMFN037P21- -------------------------------------------------------->JMFN008G07- ----------------------------------------------------------------->JMFN025H08- ------------------------------------------------------------->JMFN011O10- ----------------------------------------------------------->JMFN020M01- -------------------------------------------------->JMFS050F10- <----------------rJMFF020O01- -------------------------------------------------------->JMFS036B10- ------------------------------------------------------------->JMFN038C17- ------------------------------------------------------------>JMFN029L04- ------------------------------------------------------------->JMFN019D08- -------------------------------------------->JMFN009E07- -------------------------------------------------------------->JMFN003L11- ---------------------------------------------------------------->JMFN007G17- <-------------------------------------------------------------------rJMSF028D05* -------------------------------------------->JMFN042J10- ------------------------------------------------------------->JMFN018B02- --------------------------------------------------------------->JMFN004O16- --------------------------------------------------->JMFN004E21- ----------------------------->JMFN028J06- -------------------------------------------------------------->JMFN025I18- ---------------------------------------------------------------->JMFN035O07- ----------------------------------------------------------->JMFN039D12- ---------------------------------------------------------------->JMFN031H21- --------------------------------------------------->JMFN016L16- ------------------------------------------------------------->JMFN011E08- --------------------------------------------------------------->JMFN032G08- -------------------------------------------------------------->JMFN030E16- -------------------------------------------------------------->JMFN005B03- --------------------------------------------------------------->JMFN016P02- ------------------------------------------------>JMFN028M12- ----------------------------------------------------------------->JMFN025K18- ---------------------------------------------->JMFN035C01- ------------------------------------------------------------->JMFN016A16- ----------------------------------------------------------->JMFS097A04- --------------------------------------------------->JMFN002G11- ------------------------------------------------------------->JMFN004I21- ----------------------------------------------------------------->JMFN033N15- --------------------------------------------------->JMFN046J18- --------------------------------------------------------------->JMFN008P04- --------------------------------------------------------------->JMFN042J11- <----------------------------------------------------------------------rJMSF044G04# -------------------------------------------------------------->JMFN039H16- ---------------------------------------------------------->JMFN036P01- <------------------------------------------------------------JMFN034H06- ---------------------------------------------------------------->JMFN014J22- --------------------------------------------------------------->JMFN041J04- ------------------------------------------------------------->JMFN015B04- -------------------------------------------------------------->JMFN019E13- ---------------------------------------------------------------->JMFN031C21- --------------------------------------------------------------->JMFN016G01- -------------------------------------------------------------->JMFN015F07- -------------------------------------------------------------->JMFN025C24- <------------------------------------------------------------------rJMFF023C22- -------------------------------------------------------------->JMFN025D20- ------------------------------------------------------------->JMFN011D02- --------------------------------------------------------------->JMFN003P17- ------------------------------------------------------------->JMFN040F16- -------------------------------------------------------------->JMFN004D18- ------------------------------------------------------------>JMFN009I01- --------------------------------------------------------------->JMFN040E09- --------------------------------------------------------------->JMFN014P18- ------------------------------------------------------->JMFN004G04- --------------------------------------------------------------->JMFN038A18- ------------------------------------------------------------->JMFN016F09- ----------------------------------------------------->JMFS160H07- ---------------------------------------------------------------->JMFN020F09- ----------------------------------->JMFN028H10- ------------------------->JMFN004M08- <------------------------------------------rJMSF005C19- -------------------------------------------------------------->JMFN004P04- ---------------------------------------------------------------->JMFN028P07- --------------------------------------------------------------->JMFN015N15- -------------------------------------------------------------->JMFN015K19- --------------------------------------------------->JMFN025K16- -------------------------------------------------------------->JMFN046A08- --------------------------------------------------------------->JMFN018C05- --------------------------------------------------------->JMFN011H13- -------------------------------------------------------------->JMFS100G06- --------------------------------------------->JMSF006H10- -------------------------------------------------------------->JMFN009K18- --------------------------------------------------------------->JMFF016K14- --------------------------------------------------------------->JMFN039L12- ---------------------------------------------------->JMFN001D01- --------------------------------------------------------------->JMFN025E19- ------------------------------------------------------------->JMFN038P11- ---------------------------------------------------------------->JMFN033N11- -------------------------------------------------------------->JMFN007B02- ---------------------------------------------------------------->JMFN033H22- --------------------------------------------------------------->JMFN008O03- <------------------------------------------------------------rJMFF023P10- -------------------------------------------------------------->JMFN038O04- ------------------------------------------------------------->JMFN038H15- --------------------------------------------------------------->JMFN009G13- ---------------------------------------------------------------->JMFN003L19- ----------------------------->JMSF005C17- -------------------------------------------------------------->JMFN008J16- -------------------------------------------------------------->JMFN015J13- --------------------------------------------------->JMFN033G13- -------------------------------------------------------------->JMFN040H12- <-------------------------------------------------------------------rJMSF049G13** <---------------------------------------------------------------------rJMSF016C06** --------------------------------------------------------------------->JMSF046O15** --------------------------------------------------------------------->JMSF028A12** ------------------------>JMSF016D23** <-----------------------------------------------------------------rJMFF027F21** -------------------------------------------------------------------->JMSF040L23** <-----------------------------------------------------------------------rJMSF051L03** <-----------------------------------------------------------------------rJMSF016M12** <-----------------------------------------------------------------------rJMSF039L23** ---------------------------------------------------------------->JMFF043O24** ----------------------------------------------------------------------->JMSF039L23** <-----------------------------------------------------------------rJMSF016N22** ----------------------------------------------------------------->JMSF022L22** -------------------------------------------------------->JMSF013I05** <---------rJMFF008D15** <--------------------rJMFF032I12** <-------------------------------------------------------------------rJMSF028A12** <----------------------------------------------------------------rJMFF028L01** ---------------------->JMSF011P07** <------------------------------------------------------------------rJMFF002H16** ----------------------------------------------------------------------->JMSF049G13** <-------------------------------------------------------------------rJMSF022L22** ------------------------------------------------------------->JMSF051L03** <-----------------------------------------------------------------rJMSF010G13** <------------------------------------------------------------------rJMSF013P01** ---------------------------------------------->JMFF022M24** ------------------------------------------------------------------->JMSF051P07** <-------------------------------------------------------------rJMSF031M19** <---------------------------------------------------------rJMFF043O24** -------------------------------------------------------------------------->JMSF042N10** ------------------------------------------------------------->JMSF031M19** ------------------------------------------------>JMSF016M12** <-----------------------------------------------------------------rJMSF042N10** <-------------------------------------------------------------rJMSF029D04** -------------------------------------------->JMSF006L10** <------------------------------------------------------------rJMFF022K10** <----------------------------------------------------------------------rJMFF022M24** ------------------------>JMSF016H24** ------------------------------------------------->JMFF022K10** -------------------------------------------------------------------->JMSF029D04** <---------------------------------------------------------rJMFF043G15** <-----------------------------------------------------------------------rJMSF051P07** <---------------------------------------------------------------------rJMSF029H18** ------------------------------------------------------------->JMFF008D15** ---------------------------------------------------->JMFF002H16** <----------------------------------------------------------------rJMSF013I05** <-----------------------------------------------------------------rJMSF003N03** ---------------------------------------------------------->JMSF029H18** ---------------------------------------------------------------->JMFF043G15** ---------------------------------------------------->JMFF027F21** ----------------------------------------->JMSF013P01** <-----------------------------------------------------------------rJMSF011P07** ---------------------->JMFF032I12** <-----------------------------------------------------------------------rJMSF016J17** <-------------------------------------------------------------------rJMSF016D23** <---------------------------------------------------rJMSF006L10** <-------------------------------------------------------------------rJMSF016H24** <------------------------------------------------------------------------rJMSF040L23** --------------------------------------------------------->JMFF028L01** <--------------------------------------------------------------rJMSF046O15** ----------------------------------------------->JMSF016J17** ---------------------------------------->JMSF016C06** --------------------------------------------->JMSF010G13** -------------------------------->JMSF003N03** ----------------------------------------------->JMSF016N22**