| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMSF031E10 | Sequence | 477 | 013068 (3) | ref|XP_009613181.1| | 79.7 | PREDICTED: uncharacterized protein LOC104106355 [Nicotiana tomentosiformis] | 693 | 004835 (186) | sp|P04715.1|RBS2_PETHY | 3e-92 | RecName: Full=Ribulose bisphosphate carboxylase small chain SSU11A, chloroplast |
| JMSF037F13 | Sequence | 533 | 013068 (3) | ref|XP_009613181.1| | 79.3 | PREDICTED: uncharacterized protein LOC104106355 [Nicotiana tomentosiformis] | 691 | 004835 (186) | sp|P04715.1|RBS2_PETHY | 4e-92 | RecName: Full=Ribulose bisphosphate carboxylase small chain SSU11A, chloroplast |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig013068============================================ 608 ============================================Contig004835============================================ 997 448 --------------------------------------------------->JMSF031E10 <---------------------------------------------------------------------rJMSF031E10 449 --------------------------------------------->JMSF037F13 <---------------------------------------------------------------------rJMSF037F13 <----------------------------------------------------------------------------------------------JMFN046G13- ---------------------------------------------------------------->JMFN031C21- ----------------------------------------------------------------->JMFN025H08- ------------------------------------------------------------->JMFN038H15- -------------------------------------------------------------->JMFN007B02- ---------------------------------------------------------------->JMFN033N11- --------------------------------------------------------------->JMFN039L12- -------------------------------------------------------------->JMFN025C24- ------------------------------------------------------------->JMFN019D08- -------------------------------------------------------------->JMFN004D18- --------------------------------------------------------------->JMFN015N15- -------------------------------------------------->JMFS050F10- <------------------------------------------------------------rJMFF023P10- ---------------------------------------------------------------->JMFN031H21- --------------------------------------------------------------->JMFN032G08- ---------------------------------------------------------------->JMFN019O10- --------------------------------------------------------->JMFN011H13- <------------------------------------------------------------JMFN034H06- -------------------------------------------->JMFN042J10- --------------------------------------------------->JMFN016L16- -------------------------------------------------------------->JMFN038O04- ------------------------------------------------------------->JMFN016A16- ----------------------------->JMSF005C17- ------------------------------------------------------------>JMFN029L04- ------------------------------------------------>JMFN028M12- ------------------------------------------------------------->JMFN038P11- --------------------------------------------------------------->JMFN038A18- --------------------------------------------------->JMFN002G11- -------------------------------------------------------------->JMFN025I18- <----------------------------------------------------------------------rJMSF044G04# -------------------------------------------------------------->JMFN009K18- ---------------------------------------------------------------->JMFN006I12- -------------------------------------------------------------->JMFN025D20- ---------------------------------------------------------------->JMFN035O07- -------------------------------------------------------------->JMFN043G17- ---------------------------------------------->JMFN035C01- -------------------------------------------------------------->JMFN015K19- --------------------------------------------------------------->JMFN003P17- ------------------------------------------------------------->JMFN016M10- ---------------------------------------------------------------->JMFN014J22- ----------------------------------------------------------->JMFN039D12- -------------------------------------------------------------->JMFS100G06- ------------------------------------------------------------->JMFN011O10- --------------------------------------------------->JMFN046J18- --------------------------------------------------->JMFN004E21- --------------------------------------------------------------->JMFN016G01- ----------------------------------------------------------------->JMFN033N15- ------------------------------------------------------------->JMFN039E16- --------------------------------------------------------------->JMFF016K14- -------------------------------------------------------------->JMFN015J13- ---------------------------------------------------------------->JMFN033H22- ----------------------------------------------------------------->JMFN025K18- -------------------------------------------------------------->JMFN034F06- -------------------------------------------------------------->JMFN046A08- ----------------------------------------------------------->JMFS097A04- -------------------------------------------------------------->JMFN015F07- --------------------------------------------------------------->JMFN009G13- -------------------------------------------->JMFN009E07- --------------------------------------------------------------->JMFN008P04- -------------------------------------------------------------->JMFN019E13- ------------------------------------------------------------->JMFN037P21- <---------------------------------------------------------rJMSF006H12# --------------------------------------------------->JMFN033G13- ----------------------------------------------------->JMFN004N06- -------------------------------------------------------------->JMFN015N23- --------------------------------------------------------------->JMFN014P18- ------------------------------------------------------------->JMFN015B04- --------------------------------------------------->JMFN025K16- ----------------------------------------------------------->JMFN003I19- <------------------------------------------------------------JMSF039O13* -------------------------------------------------------------->JMFN003L11- ----------------------------------------------------->JMFS160H07- --------------------------------------------------------------->JMFN025E19- ------------------------------------------------------------>JMFN009I01- ---------------------------------------------------------->JMFN036P01- --------------------------------------------------------------->JMFN041J04- <-------------------------------------------------------------------rJMSF028D05* <---------------------------------------------------------JMFN042M08- ---------------------------------------------------------------->JMFN007G17- ---------------------------------------------------------------->JMFN020F09- ---------------------------------------------------------------->JMFN011E22- -------------------------------------------------------------->JMFN039H16- --------------------------------------------------------------->JMFN008O03- --------------->JMFN030D12- ----------------------------------------------------------->JMFN020M01- <------------------------------------------rJMSF005C19- --------------------------------------------------------------->JMFN042J11- <----------------rJMFF020O01- -------------------------------------------------------->JMFS036B10- --------------------------------------------------------------->JMFN016P02- ------------------------------------------------------------->JMFN016F09- -------------------------------------------------------->JMFN008G07- ------------------------------------------------------------->JMFN038C17- ----------------------------->JMFN028J06- -------------------------------------------------------------->JMFN005B03- ---------------------------------------------------->JMFN001D01- -------------------------------------------------------------->JMFN004P04- ------------------------------------------------->JMFN005F15- <------------------------------------------------------------------rJMFF023C22- ------------------------------------------------------------->JMFN040F16- --------------------------------------------------------------->JMFN018C05- ------------------------------------------------------->JMFN004G04- ------------------------->JMFN004M08- --------------------------------------------->JMSF006H10- -------------------------------------------------------------->JMFN040H12- --------------------------------------------------------------->JMFN004O16- ------------------------------------------------------------->JMFN011E08- ------------------------------------------------------------->JMFN011D02- -------------------------------------------------------------->JMFN030E16- ---------------------------------------------------------------->JMFN008B24- ---------------------------------------------------------------->JMFN028P07- ---------------------------------------------------------------->JMFN003L19- ----------------------------------->JMFN028H10- <-----------------------------------------------------------JMFN035M13- -------------------------------------------------------------->JMFN008J16- ------------------------------------------------------------->JMFN004I21- --------------------------------------------------------------->JMFN040E09- ------------------------------------------------------------->JMFN029L20- ------------------------------------------------------------->JMFN018B02- <--------------------rJMFF032I12** <---------------------------------------------------------rJMFF043G15** <---------------------------------------------------------------------rJMSF016C06** <-----------------------------------------------------------------rJMFF027F21** ---------------------------------------------->JMFF022M24** ------------------------------------------------------------->JMSF051L03** ---------------------------------------------------------------->JMFF043G15** --------------------------------------------------------------------->JMSF028A12** ------------------------------------------------------------->JMFF008D15** ----------------------------------------------->JMSF016N22** <-------------------------------------------------------------------rJMSF028A12** <------------------------------------------------------------rJMFF022K10** <-----------------------------------------------------------------------rJMSF051L03** <------------------------------------------------------------------rJMSF013P01** --------------------------------------------------------->JMFF028L01** ---------------------------------------------------->JMFF002H16** ---------------------------------------->JMSF016C06** <-------------------------------------------------------------------rJMSF016H24** <---------------------------------------------------------------------rJMSF029H18** <--------------------------------------------------------------rJMSF046O15** ---------------------------------------------------->JMFF027F21** -------------------------------------------------------------------------->JMSF042N10** -------------------------------------------------------------------->JMSF040L23** ----------------------------------------------------------------------->JMSF049G13** ------------------------>JMSF016D23** ------------------------------------------------>JMSF016M12** <-----------------------------------------------------------------rJMSF003N03** ---------------------->JMFF032I12** <---------------------------------------------------rJMSF006L10** <-----------------------------------------------------------------rJMSF016N22** ------------------------>JMSF016H24** <-----------------------------------------------------------------------rJMSF051P07** <-----------------------------------------------------------------rJMSF011P07** <----------------------------------------------------------------rJMSF013I05** ---------------------------------------------------------------->JMFF043O24** -------------------------------------------------------->JMSF013I05** ------------------------------------------------------------->JMSF031M19** <-----------------------------------------------------------------rJMSF010G13** <------------------------------------------------------------------rJMFF002H16** --------------------------------------------->JMSF010G13** <-----------------------------------------------------------------------rJMSF016J17** <------------------------------------------------------------------------rJMSF040L23** <-------------------------------------------------------------------rJMSF016D23** <---------------------------------------------------------rJMFF043O24** ---------------------->JMSF011P07** -------------------------------->JMSF003N03** <-------------------------------------------------------------rJMSF031M19** --------------------------------------------------------------------->JMSF046O15** <-----------------------------------------------------------------------rJMSF039L23** ------------------------------------------------------------------->JMSF051P07** ---------------------------------------------------------->JMSF029H18** <-----------------------------------------------------------------------rJMSF016M12** -------------------------------------------------------------------->JMSF029D04** ----------------------------------------->JMSF013P01** ------------------------------------------------->JMFF022K10** ----------------------------------------------------------------------->JMSF039L23** <----------------------------------------------------------------rJMFF028L01** <---------rJMFF008D15** <-------------------------------------------------------------------rJMSF022L22** <----------------------------------------------------------------------rJMFF022M24** ----------------------------------------------------------------->JMSF022L22** <-------------------------------------------------------------rJMSF029D04** ----------------------------------------------->JMSF016J17** <-----------------------------------------------------------------rJMSF042N10** <-------------------------------------------------------------------rJMSF049G13** -------------------------------------------->JMSF006L10**