clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF005B14 | Sequence | 252 | 004946 (3) | ref|XP_007023315.1| | 3e-06 | Leucine-rich repeat family protein isoform 2, partial [Theobroma cacao] gb|EOY2 | 340 | 009930 (3) | ref|XP_009611338.1| | 5e-05 | PREDICTED: F-box/LRR-repeat protein 13 isoform X1 [Nicotiana tomentosiformis] r |
JMSF015H06 | Sequence | 552 | 004946 (3) | ref|XP_004235905.1| | 9e-52 | PREDICTED: putative adenylate cyclase regulatory protein [Solanum lycopersicum] | 739 | 009930 (3) | ref|XP_009796749.1| | 1e-33 | PREDICTED: F-box/LRR-repeat protein 14 isoform X2 [Nicotiana sylvestris] |
JMSF043C20 | Sequence | 816 | 004946 (3) | ref|XP_009611340.1| | 1e-93 | PREDICTED: F-box/LRR-repeat protein 13 isoform X2 [Nicotiana tomentosiformis] | 838 | 009930 (3) | ref|XP_009796749.1| | 5e-46 | PREDICTED: F-box/LRR-repeat protein 14 isoform X2 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004946============================================ 818 ============================================Contig009930============================================ 939 77 --------------------------------------------------------->JMSF015H06 <------------------------------------------------------------------------------rJMSF015H06 127 ------------------------------>JMSF005B14 <----------------------------------rJMSF005B14 180 ------------------------------------------------------------------------------------------>JMSF043C20 <----------------------------------------------------------------------------------------rJMSF043C20