List of clones in pair P001636.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN041F12Sequence503001970 (37)ref|XP_009622441.1|1e-43PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS006D06Sequence561001970 (37)ref|XP_009622441.1|2e-61PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS006G02Sequence590001970 (37)ref|XP_009622441.1|2e-63PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS009H03Sequence574001970 (37)ref|XP_009622441.1|5e-68PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS013H06Sequence634001970 (37)ref|XP_009622441.1|1e-70PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS019D08Sequence582001970 (37)ref|XP_009622441.1|3e-61PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS025A02Sequence620001970 (37)ref|XP_009622441.1|8e-68PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS026F09Sequence630001970 (37)ref|XP_009622441.1|9e-68PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS030F08Sequence591001970 (37)ref|XP_008229059.1|5e-89PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Prunu
JMFS041B06Sequence641001970 (37)ref|XP_009622441.1|2e-72PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS051F06Sequence629001970 (37)ref|XP_009622441.1|3e-66PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS053B03Sequence619001970 (37)ref|XP_009622441.1|7e-67PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS053D02Sequence560001970 (37)gb|KDO49592.1|9e-51hypothetical protein CISIN_1g0026962mg, partial [Citrus sinensis] gb|KDO49593.1|
JMFS055E05Sequence616001970 (37)ref|XP_009622441.1|8e-68PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS069G12Sequence609001970 (37)ref|XP_009622441.1|4e-61PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS074E05Sequence627001970 (37)ref|XP_009622441.1|2e-76PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS078F12Sequence415000454 (4)gb|KDO49596.1|7e-11hypothetical protein CISIN_1g0026961mg, partial [Citrus sinensis] gb|KDO49597.1|
JMFS081B01Sequence627001970 (37)ref|XP_009622441.1|4e-59PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS085B01Sequence595001970 (37)ref|XP_009622441.1|8e-87PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS090B04Sequence612001970 (37)ref|XP_009622441.1|6e-54PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS101D01Sequence619001970 (37)ref|XP_009622441.1|2e-66PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS107D10Sequence626001970 (37)ref|XP_009622441.1|1e-71PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS107G07Sequence620001970 (37)ref|XP_009622441.1|6e-73PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS109C06Sequence627001970 (37)ref|XP_009622441.1|5e-75PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS110C11Sequence627001970 (37)ref|XP_009622441.1|3e-60PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS112D10Sequence626001970 (37)ref|XP_009622441.1|1e-71PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS117E02Sequence551001970 (37)ref|XP_009622441.1|3e-49PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS126B12Sequence626001970 (37)ref|XP_009622441.1|8e-74PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS129F07Sequence608001970 (37)ref|XP_009622441.1|7e-68PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS137F04Sequence600001970 (37)ref|XP_009622441.1|9e-62PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS139D09Sequence626001970 (37)ref|XP_009622441.1|7e-71PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS139H03Sequence613001970 (37)ref|XP_009622441.1|4e-75PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS147B03Sequence618001970 (37)gb|KDO49592.1|5e-65hypothetical protein CISIN_1g0026962mg, partial [Citrus sinensis] gb|KDO49593.1|
JMFS165D06Sequence629001970 (37)ref|XP_009622441.1|5e-75PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMFS167C08Sequence625001970 (37)ref|XP_009622441.1|3e-60PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot
JMSF003J24Sequence295001970 (37)ref|XP_009622441.1|1e-09PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot698000454 (4)emb|CDP15868.1|2e-77unnamed protein product [Coffea canephora]
JMSF013C16Sequence453001970 (37)ref|XP_009622441.1|6e-31PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot697000454 (4)emb|CDP15868.1|4e-78unnamed protein product [Coffea canephora]
JMSF013M04Sequence509001970 (37)ref|XP_009622441.1|1e-40PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Nicot700000454 (4)emb|CDP15868.1|4e-76unnamed protein product [Coffea canephora]

Contig 1970 BLAST Hits against nr-aa DB Show

Contig 454 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig001970============================================1033         ============================================Contig000454============================================ 752
  79   ------------------------------------------->JMSF013C16                                                         <--------------------------------------------------------------------------------------------rJMSF013C16  
  87    ------------------------------------------------>JMSF013M04                                                    <-------------------------------------------------------------------------------------------rJMSF013M04  
 175             ---------------------------->JMSF003J24                                                               <-------------------------------------------------------------------------------------------rJMSF003J24  
          ----------------------------------------------------------->JMFS053B03-                                     
          ------------------------------------------------>JMFN041F12-                                                
            ----------------------------------------------------------->JMFS074E05-                                   
        ------------------------------------------------------------>JMFS026F09-                                      
          ----------------------------------------------------------->JMFS147B03-                                     
          ----------------------------------------------------------->JMFS055E05-                                     
         ------------------------------------------------------------>JMFS051F06-                                     
                 ---------------------------------------------------->JMFS009H03-                                     
       ---------------------------------------------------------->JMFS069G12-                                         
                                                -------------------------------------------------------->JMFS030F08-  
                     --------------------------------------------------------->JMFS085B01-                            
           --------------------------------------------------------->JMFS129F07-                                      
     ------------------------------------------------------------>JMFS110C11-                                         
         ----------------------------------------------------------->JMFS101D01-                                      
          ------------------------------------------------------------>JMFS139D09-                                    
        --------------------------------------------------------->JMFS137F04-                                         
         ------------------------------------------------------------->JMFS041B06-                                    
          ------------------------------------------------------------>JMFS013H06-                                    
          -------------------------------------------------------->JMFS006G02-                                        
           ------------------------------------------------------------>JMFS112D10-                                   
            ----------------------------------------------------------->JMFS107G07-                                   
            ----------------------------------------------------->JMFS053D02-                                         
           --------------------------------------------------->JMFS090B04-                                            
     ------------------------------------------------------------>JMFS167C08-                                         
          ------------------------------------------------------------>JMFS107D10-                                    
          ------------------------------------------------------->JMFS019D08-                                         
            ------------------------------------------------------------>JMFS165D06-                                  
     ------------------------------------------------------------>JMFS081B01-                                         
             ---------------------------------------------------------->JMFS139H03-                                   
        ---------------------------------------------------->JMFS117E02-                                              
         ----------------------------------------------------------->JMFS025A02-                                      
           ------------------------------------------------------------>JMFS126B12-                                   
            ----------------------------------------------------->JMFS006D06-                                         
            ------------------------------------------------------------>JMFS109C06-                                  
                                                                                                                                                                     ---------------------------------------------------->JMFS078F12-