clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF002P06 | Sequence | 591 | 002512 (16) | ref|XP_009593018.1| | 9e-84 | PREDICTED: 60S ribosomal protein L7a-2 [Nicotiana tomentosiformis] ref|XP_009793 | |||||
JMFF005O13 | Sequence | 527 | 002512 (16) | ref|XP_009593018.1| | 1e-69 | PREDICTED: 60S ribosomal protein L7a-2 [Nicotiana tomentosiformis] ref|XP_009793 | 682 | 002512 (16) | ref|XP_009626627.1| | 6e-107 | PREDICTED: 60S ribosomal protein L7a-1 [Nicotiana tomentosiformis] ref|XP_009773 |
JMFF010N21 | Sequence | 597 | 002512 (16) | ref|XP_009593018.1| | 4e-85 | PREDICTED: 60S ribosomal protein L7a-2 [Nicotiana tomentosiformis] ref|XP_009793 | 756 | 002512 (16) | ref|XP_009626627.1| | 8e-117 | PREDICTED: 60S ribosomal protein L7a-1 [Nicotiana tomentosiformis] ref|XP_009773 |
JMFF019B18 | Sequence | 578 | 002512 (16) | ref|XP_009593018.1| | 1e-80 | PREDICTED: 60S ribosomal protein L7a-2 [Nicotiana tomentosiformis] ref|XP_009793 | 742 | 002512 (16) | ref|XP_009593018.1| | 6e-112 | PREDICTED: 60S ribosomal protein L7a-2 [Nicotiana tomentosiformis] ref|XP_009793 |
JMFF023H06 | Sequence | 460 | 002512 (16) | ref|XP_009593018.1| | 9e-50 | PREDICTED: 60S ribosomal protein L7a-2 [Nicotiana tomentosiformis] ref|XP_009793 | 773 | 002512 (16) | ref|XP_009593018.1| | 3e-114 | PREDICTED: 60S ribosomal protein L7a-2 [Nicotiana tomentosiformis] ref|XP_009793 |
JMFF029K14 | Sequence | 470 | 002512 (16) | ref|XP_009593018.1| | 7e-65 | PREDICTED: 60S ribosomal protein L7a-2 [Nicotiana tomentosiformis] ref|XP_009793 | |||||
JMFF033G22 | Sequence | 555 | 000189 (3) | ref|XP_009626627.1| | 6e-50 | PREDICTED: 60S ribosomal protein L7a-1 [Nicotiana tomentosiformis] ref|XP_009773 | 770 | 002512 (16) | ref|XP_009626627.1| | 1e-121 | PREDICTED: 60S ribosomal protein L7a-1 [Nicotiana tomentosiformis] ref|XP_009773 |
JMFF033I01 | Sequence | 349 | 000189 (3) | ref|XP_002525923.1| | 6e-14 | 60S ribosomal protein L7a, putative [Ricinus communis] gb|EEF36443.1| 60S riboso | 618 | 002512 (16) | ref|XP_009593018.1| | 5e-111 | PREDICTED: 60S ribosomal protein L7a-2 [Nicotiana tomentosiformis] ref|XP_009793 |
JMSF003L01 | Sequence | 362 | 002512 (16) | ref|XP_009626627.1| | 2e-36 | PREDICTED: 60S ribosomal protein L7a-1 [Nicotiana tomentosiformis] ref|XP_009773 | 695 | 002512 (16) | ref|XP_009593018.1| | 3e-105 | PREDICTED: 60S ribosomal protein L7a-2 [Nicotiana tomentosiformis] ref|XP_009793 |
JMSF010L11 | Sequence | 349 | 000189 (3) | ref|XP_004304533.1| | 3e-44 | PREDICTED: 60S ribosomal protein L7a-2 [Fragaria vesca subsp. vesca] | 771 | 002512 (16) | ref|XP_009593018.1| | 6e-76 | PREDICTED: 60S ribosomal protein L7a-2 [Nicotiana tomentosiformis] ref|XP_009793 |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000189============================================ 555 ============================================Contig002512============================================ 957 34 --------------------------------------------------------------------------------------------------->JMFF033G22 <-------------------------------------------------------------------------------rJMFF033G22 108 ------------------------------------------------------------->JMFF033I01 <----------------------------------------------------------------rJMFF033I01 318 ---------------------------------------------->JMSF010L11 <---------------------------------------------------------------rJMSF010L11 ----------------------------------------------------------->JMFF013E22* ------------------------------------------------>JMFF029K14- ------------------------------------------------------------->JMFF002P06- <-------------------------------------------------------rJMSF003L01** ----------------------------------------------->JMFF023H06** <----------------------------------------------------------------------rJMFF005O13** ----------------------------------------------------------->JMFF019B18** ------------------------------------------------------>JMFF005O13** ------------------------------------------------------------->JMFF010N21** ------------------------------------->JMSF003L01** <-----------------------------------------------------------rJMFF023H06** <------------------------------------------------------------------------------rJMFF010N21** <----------------------------------------------------------rJMFF019B18**