clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF039I21 | Sequence | 268 | 002148 (5) | gb|ACB37380.1| | 3e-05 | 5-enolpyruvylshikimate 3-phosphate synthase [Calystegia hederacea] | 666 | 009846 (3) | gb|ACB37380.1| | 1e-99 | 5-enolpyruvylshikimate 3-phosphate synthase [Calystegia hederacea] |
JMFF049G07 | Sequence | 425 | 002148 (5) | gb|ACB37380.1| | 5e-62 | 5-enolpyruvylshikimate 3-phosphate synthase [Calystegia hederacea] | 318 | 009846 (3) | ref|NP_001268176.1| | 6e-24 | 5-enolpyruvylshikimate-3-phosphate synthase [Vitis vinifera] emb|CBI38903.3| unn |
JMSF032M23 | Sequence | 651 | 002148 (5) | gb|ACB37380.1| | 1e-98 | 5-enolpyruvylshikimate 3-phosphate synthase [Calystegia hederacea] | 584 | 009846 (3) | ref|NP_001268176.1| | 3e-85 | 5-enolpyruvylshikimate-3-phosphate synthase [Vitis vinifera] emb|CBI38903.3| unn |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002148============================================ 959 ============================================Contig009846============================================ 643 374 ----------------------------------------->JMFF049G07 <------------------------------------------------rJMFF049G07 458 ------------>JMFF039I21 <--------------------------------------------------------------------------------------rJMFF039I21 458 ------------------------------------------------------------>JMSF032M23 <---------------------------------------------------------------------------rJMSF032M23 ------------------------------------------------------------>JMSF053M17* ---------------------------------------->JMSF012P02*