Contig 009846:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039I21Sequence268002148 (5)gb|ACB37380.1|3e-055-enolpyruvylshikimate 3-phosphate synthase [Calystegia hederacea]666009846 (3)gb|ACB37380.1|1e-995-enolpyruvylshikimate 3-phosphate synthase [Calystegia hederacea]
JMFF049G07Sequence425002148 (5)gb|ACB37380.1|5e-625-enolpyruvylshikimate 3-phosphate synthase [Calystegia hederacea]318009846 (3)ref|NP_001268176.1|6e-245-enolpyruvylshikimate-3-phosphate synthase [Vitis vinifera] emb|CBI38903.3| unn
JMSF032M23Sequence651002148 (5)gb|ACB37380.1|1e-985-enolpyruvylshikimate 3-phosphate synthase [Calystegia hederacea]584009846 (3)ref|NP_001268176.1|3e-855-enolpyruvylshikimate-3-phosphate synthase [Vitis vinifera] emb|CBI38903.3| unn

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF039I21+ CTCGAGAAGATGGGAGCCGAAGTTTTGTGGACAGAGAACAGTG
                      ____________________________________________________________
consensus CTCGAGAAGATGGGAGCCGAAGTTTTGTGGACAGAGAACAGTG
 
. : . : . : . : . : . :
rJMSF032M23+ CCTTCGGGAAGGAAACACTTACGTGCCATTGACG
rJMFF039I21+ TTNCCGTGAAAGGACCACCACGGGCACCTTCGGGAAGGAAACACTTACGTGCCATNGACG
                      ____________________________________________________________
consensus TTNCCGTGAAAGGACCACCACGGGCACCTTCGGGAAGGAAACACTTACGTGCCATTGACG
 
. : . : . : . : . : . :
rJMSF032M23+ TGAACATGAATAAAATGCCCGATGTTGCCATGACTCTTGCTGTAGTTGCGCTATTTGCTG
rJMFF039I21+ TGAACATGAATAAAATGCCCGATGTTGCCATGACTCTTGCTGTAGTTGCGCTATTTGCTG
                      ____________________________________________________________
consensus TGAACATGAATAAAATGCCCGATGTTGCCATGACTCTTGCTGTAGTTGCGCTATTTGCTG
 
. : . : . : . : . : . :
rJMSF032M23+ ATGGCCCGACAGCCATAAGAGACGTTGCTAGCTGGAGAGTTAAGGAAACCGAACGGATGA
rJMFF039I21+ ATGGCCCGACAGCCATAAGAGACGTTGCTAGCTGGAGAGTTAAGGAAACCGAACGGATGA
                      ____________________________________________________________
consensus ATGGCCCGACAGCCATAAGAGACGTTGCTAGCTGGAGAGTTAAGGAAACCGAACGGATGA
 
. : . : . : . : . : . :
rJMSF032M23+ TTGCTATATGCACAGAACTTAGAAAGCTGGGAGCGACGGTCGAGGAAGGGCCAGACTACT
rJMFF039I21+ TTGCTATATGCACAGAACTTAGAAAGCTGGGAGCGACGGTCGAGGAAGGGCCAGACTACT
                      ____________________________________________________________
consensus TTGCTATATGCACAGAACTTAGAAAGCTGGGAGCGACGGTCGAGGAAGGGCCAGACTACT
 
. : . : . : . : . : . :
rJMSF032M23+ GTATAATCACTCCACCCGAGAAACTAAACGTGACGGAAATCGACACATACGACGATCACA
rJMFF039I21+ GTATAATCACTCCACCCGAGAAACTAAACGTGACGGAAATCGACACATACGACGATCACA
rJMFF049G07+ ACACATACGACGATCACA
                      ____________________________________________________________
consensus GTATAATCACTCCACCCGAGAAACTAAACGTGACGGAAATCGACACATACGACGATCACA
 
. : . : . : . : . : . :
rJMSF032M23+ GAATGGCCATGGCGTTTTCTCTTGCTGCTTGTGCCGAGGTACCAGTCACCATTAAAGATC
rJMFF039I21+ GAATGGCCATGGCGTTTTCTCTTGCTGCTTGTGCCGAGGTACCAGTCACCATTAAAGATC
rJMFF049G07+ GAATGGCCATGGCGTTTTCTCTTGCTGCTTGTGCCGAGGTACCAGTCACCATTAAAGATC
                      ____________________________________________________________
consensus GAATGGCCATGGCGTTTTCTCTTGCTGCTTGTGCCGAGGTACCAGTCACCATTAAAGATC
 
. : . : . : . : . : . :
rJMSF032M23+ CTGGCTGTACTCGCAAGACTTTCCCAGATTATTTTGAGGTTCTTCAGAGGTTTTCTAAGC
rJMFF039I21+ CTGGCTGTACTCGCAAGACTTTCCCAGATTATTTTGAGGTTCTTCAGAGGTTTTCTAAGC
rJMFF049G07+ CTGGCTGTACCCGCAAGACTTTCCCAGATTATTTTGAGGTTCTTCAGAGGTTTTCTAAGC
                      ____________________________________________________________
consensus CTGGCTGTACTCGCAAGACTTTCCCAGATTATTTTGAGGTTCTTCAGAGGTTTTCTAAGC
 
. : . : . : . : . : . :
rJMSF032M23+ ATTAAAAAGGTTTCCTTTACATCCATTTTGGAAGGTAGAGATCTGTGTTAGTTGAAAGAG
rJMFF039I21+ ATTAAAAAGGTTTCCTTTACATCCATTTTGGAAGGTAGAGATCTGTGTTAGTTGAAAGAG
rJMFF049G07+ ATTAAAAAGGTTTCCTTTACATCCATTTTGGAAGGTAGAGATCTGTGTTAGTTGAAAGAG
                      ____________________________________________________________
consensus ATTAAAAAGGTTTCCTTTACATCCATTTTGGAAGGTAGAGATCTGTGTTAGTTGAAAGAG
 
. : . : . : . : . : . :
rJMSF032M23+ CTACTCCCAACTACCATGTTCCTCTTAGTTAAGGTT
rJMFF039I21+ CTACTCCCAACTACCATGTTCCTCTTAGTTAAGGTT
rJMFF049G07+ CTACTCCCAACTACCATGTTCCTCTTAGTTAAGGTTGAACTGGTTTTCATTTGCAAATAT
                      ____________________________________________________________
consensus CTACTCCCAACTACCATGTTCCTCTTAGTTAAGGTTGAACTGGTTTTCATTTGCAAATAT
 
. : . : . : . : . : . :
rJMFF049G07+ AAACACGTTAAACATCAAGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus AAACACGTTAAACATCAAGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG