List of clones in pair P001218.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001A15Sequence394001197 (4)ref|XP_009470923.1|5e-21PREDICTED: CCR4-NOT transcription complex subunit 11 [Nipponia nippon]
JMFF018N19Sequence572013350 (5)ref|XP_009762552.1|8e-69PREDICTED: CCR4-NOT transcription complex subunit 11 isoform X2 [Nicotiana sylv760001197 (4)ref|XP_009762550.1|4e-123PREDICTED: CCR4-NOT transcription complex subunit 11 isoform X1 [Nicotiana sylv
JMFF025O15Sequence631013350 (5)ref|XP_009597617.1|5e-92PREDICTED: CCR4-NOT transcription complex subunit 11 isoform X2 [Nicotiana tome766001197 (4)ref|XP_009762550.1|5e-125PREDICTED: CCR4-NOT transcription complex subunit 11 isoform X1 [Nicotiana sylv
JMFF044C17Sequence634013350 (5)ref|XP_009762552.1|1e-79PREDICTED: CCR4-NOT transcription complex subunit 11 isoform X2 [Nicotiana sylv621001197 (4)ref|XP_006349655.1|4e-79PREDICTED: CCR4-NOT transcription complex subunit 11-like [Solanum tuberosum]
JMSF045E10Sequence426013350 (5)ref|XP_006349655.1|3e-11PREDICTED: CCR4-NOT transcription complex subunit 11-like [Solanum tuberosum]

Contig 13350 BLAST Hits against nr-aa DB Show

Contig 1197 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig013350============================================ 712         ============================================Contig001197============================================ 804
  26     ---------------------------------------------------------------------------------------->JMFF044C17                                 <----------------------------------------------------------------------------rJMFF044C17  
  63     ------------------------------------------------------------------------------->JMFF018N19                   <----------------------------------------------------------------------------------------------rJMFF018N19  
 120             ---------------------------------------------------------------------------------------->JMFF025O15   <----------------------------------------------------------------------------------------------rJMFF025O15  
              ----------------------------->JMSF045E10-                                                               
     ----------------------------------------------------------------------------------->JMSF021L13#                  
                                                                                                                                                                      <----------------------------------------------rJMFF001A15-