clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF009M07 | Sequence | 555 | 010236 (5) | ref|XP_009765667.1| | 4e-21 | PREDICTED: pentatricopeptide repeat-containing protein At1g63150-like [Nicotian | |||||
JMFF026F22 | Sequence | 589 | 010236 (5) | 769 | 008320 (4) | ref|XP_009765667.1| | 2e-35 | PREDICTED: pentatricopeptide repeat-containing protein At1g63150-like [Nicotian | |||
JMFF027M23 | Sequence | 609 | 010236 (5) | ref|XP_009765667.1| | 3e-32 | PREDICTED: pentatricopeptide repeat-containing protein At1g63150-like [Nicotian | 731 | 008320 (4) | ref|XP_009765667.1| | 1e-30 | PREDICTED: pentatricopeptide repeat-containing protein At1g63150-like [Nicotian |
JMFF037M20 | Sequence | 570 | 010236 (5) | ref|XP_009765667.1| | 3e-27 | PREDICTED: pentatricopeptide repeat-containing protein At1g63150-like [Nicotian | 791 | 008320 (4) | ref|XP_009765667.1| | 1e-36 | PREDICTED: pentatricopeptide repeat-containing protein At1g63150-like [Nicotian |
JMFF043D18 | Sequence | 607 | 010236 (5) | ref|XP_009765667.1| | 3e-32 | PREDICTED: pentatricopeptide repeat-containing protein At1g63150-like [Nicotian | 640 | 008320 (4) | ref|XP_011095140.1| | 2e-09 | PREDICTED: pentatricopeptide repeat-containing protein At1g62680, mitochondrial |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010236============================================ 815 ============================================Contig008320============================================ 854 87 ----------------------------------------------------------------------->JMFF026F22 <-----------------------------------------------------------------------------------------rJMFF026F22 208 ------------------------------------------------------------------------->JMFF043D18 <-------------------------------------------------------------------------rJMFF043D18 281 --------------------------------------------------------------------->JMFF037M20 <-------------------------------------------------------------------------------------------rJMFF037M20 281 -------------------------------------------------------------------------->JMFF027M23 <-------------------------------------------------------------------------------------rJMFF027M23 ------------------------------------------------------------------>JMFF009M07-