clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF003P21 | Sequence | 140 | 009855 (5) | ||||||||
JMFF020I05 | Sequence | 567 | 008894 (4) | ref|XP_009354546.1| | 5e-27 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X5 [Pyrus x | 598 | 009855 (5) | ref|XP_009795583.1| | 1e-102 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Nicotian |
JMFF041L20 | Sequence | 655 | 008894 (4) | ref|XP_009354543.1| | 3e-48 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Pyrus x | 535 | 009855 (5) | ref|XP_009607374.1| | 1e-86 | PREDICTED: probable NOT transcription complex subunit VIP2 [Nicotiana tomentosi |
JMFF050E12 | Sequence | 615 | 008894 (4) | ref|XP_009354546.1| | 6e-25 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X5 [Pyrus x | 622 | 009855 (5) | ref|XP_009607374.1| | 1e-92 | PREDICTED: probable NOT transcription complex subunit VIP2 [Nicotiana tomentosi |
JMSF035N02 | Sequence | 663 | 008894 (4) | ref|XP_009354541.1| | 8e-54 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X1 [Pyrus x | 648 | 009855 (5) | ref|XP_009607374.1| | 1e-95 | PREDICTED: probable NOT transcription complex subunit VIP2 [Nicotiana tomentosi |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008894============================================ 784 ============================================Contig009855============================================ 742 2 ----------------------------------------------------------------------------->JMFF050E12 <--------------------------------------------------------------rJMFF050E12 227 ----------------------------------------------------------------------->JMFF041L20 <------------------------------------------------------rJMFF041L20 243 --------------------------------------------------------->JMFF020I05 <----------------------------------------------------rJMFF020I05 264 ------------------------------------------------------------------------------>JMSF035N02 <--------------------------------------------------------------------------------------rJMSF035N02 <--------------rJMFF003P21-