List of clones in pair P000989.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027D14Sequence301008999 (14)680011079 (4)emb|CDP16075.1|3e-67unnamed protein product [Coffea canephora]
JMFS009G09Sequence610008999 (14)gb|ABN10955.2|9e-103auxin response factor 8 [Ipomoea nil]
JMFS018G04Sequence584008999 (14)gb|ABN10955.2|2e-09auxin response factor 8 [Ipomoea nil]
JMFS021A10Sequence604008999 (14)gb|ABN10955.2|6e-14auxin response factor 8 [Ipomoea nil]
JMFS038E04Sequence643008999 (14)gb|ABN10955.2|2e-110auxin response factor 8 [Ipomoea nil]
JMFS042D07Sequence202008999 (14)gb|ABN10955.2|4e-06auxin response factor 8 [Ipomoea nil]
JMFS078F07Sequence604008999 (14)gb|ABN10955.2|1e-129auxin response factor 8 [Ipomoea nil]
JMFS135G08Sequence659008999 (14)gb|ABN10955.2|3e-19auxin response factor 8 [Ipomoea nil]
JMFS137C06Sequence614008999 (14)gb|ABN10955.2|2e-135auxin response factor 8 [Ipomoea nil]
JMFS148C08Sequence400008999 (14)
JMFS157H09Sequence639008999 (14)gb|ABN10955.2|4e-124auxin response factor 8 [Ipomoea nil]
JMSF007E02Sequence284008999 (14)780011079 (4)emb|CDP16075.1|2e-100unnamed protein product [Coffea canephora]
JMSF023M18Sequence298008999 (14)609011079 (4)emb|CDP16075.1|1e-62unnamed protein product [Coffea canephora]
JMSF023O24Sequence626008999 (14)gb|ABN10955.2|8e-09auxin response factor 8 [Ipomoea nil]740011079 (4)ref|XP_009602214.1|8e-92PREDICTED: auxin response factor 6-like isoform X2 [Nicotiana tomentosiformis]

Contig 8999 BLAST Hits against nr-aa DB Show

Contig 11079 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig008999============================================1083         ============================================Contig011079============================================ 811
  62       -------------------------->JMFF027D14                                                                                               <--------------------------------------------------------------------------rJMFF027D14  
  89        ------------------------->JMSF023M18                                                                                             <--------------------------------------------------------------------------rJMSF023M18  
  90        ------------------------------------------------->JMSF023O24                                                                       <------------------------------------------------------------------------rJMSF023O24  
 102        ------------------------->JMSF007E02                                                                      <-----------------------------------------------------------------------------------------------rJMSF007E02  
         ----------------------------------------------------------->JMFS135G08-                                      
                                       ------------------>JMFS042D07-                                                 
                                      ---------------------------------------------------------->JMFS038E04-          
                                          ---------------------------------------------------------->JMFS157H09-      
                                               ------------------------------------------------------->JMFS078F07-    
                                      ------------------------------------------------------->JMFS009G09-             
     ----------------------------------------------------->JMFS018G04-                                                
       ------------------------------>JMFS148C08-                                                                     
                                                -------------------------------------------------------->JMFS137C06-  
     ------------------------------------------------------->JMFS021A10-