List of clones in pair P000976.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002K22Sequence560000509 (18)ref|XP_010507605.1|1e-39PREDICTED: neutral ceramidase-like [Camelina sativa]675002814 (7)gb|ABK95842.1|3e-80unknown [Populus trichocarpa]
JMFN012M04Sequence618002814 (7)gb|ABK95842.1|3e-85unknown [Populus trichocarpa]
JMFN036I21Sequence469002814 (7)gb|ABK95842.1|8e-89unknown [Populus trichocarpa]
JMFS001F12Sequence585000509 (18)ref|XP_008457412.1|6e-51PREDICTED: neutral ceramidase-like isoform X1 [Cucumis melo]
JMFS011D11Sequence613000509 (18)ref|XP_008457412.1|3e-56PREDICTED: neutral ceramidase-like isoform X1 [Cucumis melo]
JMFS012A03Sequence616000509 (18)ref|XP_010507605.1|2e-38PREDICTED: neutral ceramidase-like [Camelina sativa]
JMFS022D07Sequence586000509 (18)ref|XP_008457412.1|5e-32PREDICTED: neutral ceramidase-like isoform X1 [Cucumis melo]
JMFS077D03Sequence642000509 (18)ref|XP_008457412.1|2e-62PREDICTED: neutral ceramidase-like isoform X1 [Cucumis melo]
JMFS078B12Sequence566002814 (7)gb|ABK95842.1|1e-72unknown [Populus trichocarpa]
JMFS084E04Sequence621000509 (18)ref|XP_010507605.1|2e-38PREDICTED: neutral ceramidase-like [Camelina sativa]
JMFS103B04Sequence563000509 (18)ref|XP_008457412.1|3e-46PREDICTED: neutral ceramidase-like isoform X1 [Cucumis melo]
JMFS114B01Sequence625000509 (18)ref|XP_010507605.1|2e-39PREDICTED: neutral ceramidase-like [Camelina sativa]
JMFS123C12Sequence575000509 (18)ref|XP_008457412.1|2e-36PREDICTED: neutral ceramidase-like isoform X1 [Cucumis melo]
JMFS136D05Sequence607000509 (18)ref|XP_008457412.1|7e-56PREDICTED: neutral ceramidase-like isoform X1 [Cucumis melo]
JMFS137H06Sequence600000509 (18)
JMFS138B08Sequence620000509 (18)ref|XP_008457412.1|5e-49PREDICTED: neutral ceramidase-like isoform X1 [Cucumis melo]
JMFS140F04Sequence623000509 (18)ref|XP_010507605.1|2e-38PREDICTED: neutral ceramidase-like [Camelina sativa]
JMSF009P08Sequence237000509 (18)798002814 (7)gb|ABK95842.1|9e-129unknown [Populus trichocarpa]
JMSF016K06Sequence558000509 (18)ref|XP_010507605.1|8e-39PREDICTED: neutral ceramidase-like [Camelina sativa]759002814 (7)gb|ABK95842.1|2e-65unknown [Populus trichocarpa]
JMSF041B13Sequence532000509 (18)ref|XP_008457412.1|8e-15PREDICTED: neutral ceramidase-like isoform X1 [Cucumis melo]637002814 (7)gb|ABK95842.1|2e-84unknown [Populus trichocarpa]

Contig 509 BLAST Hits against nr-aa DB Show

Contig 2814 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000509============================================ 767         ============================================Contig002814============================================1039
  98              ------------------------------------------------------------------------>JMSF016K06                                            <------------------------------------------------------------------------rJMSF016K06  
 244              ------------------------------------------------------------------------>JMFF002K22                                      <----------------------------------------------------------------rJMFF002K22  
 254   ------------------------------>JMSF009P08                                                                      <----------------------------------------------------------------------------rJMSF009P08  
 273   -------------------------------------------------------------------->JMSF041B13                                                <----------------------------------------------------------rJMSF041B13  
                      ------------------------------------------------------------------------------>JMFS136D05-      
          --------------------------------------------------------------------------->JMFS022D07-                     
         -------------------------------------------------------------------------------->JMFS084E04-                 
                 ------------------------------------------------------------------>JMFF046B18#                       
              -------------------------------------------------------------------------->JMFS123C12-                  
         -------------------------------------------------------------------------------->JMFS140F04-                 
          ------------------------------------------------------------------------------->JMFS012A03-                 
                      --------------------------------------------------------------------------->JMFS001F12-         
                     ----------------------------------------------------------------------------------->JMFS077D03-  
         -------------------------------------------------------------------------------->JMFS114B01-                 
                -------------------------------------------------------------------------------->JMFS138B08-          
                      ------------------------------------------------------------------------------>JMFS011D11-      
     ------------------------------------------------------------->JMFS137H06-                                        
                     ------------------------------------------------------------------------>JMFS103B04-             
                                                                                                                          -------------------------------------------->JMFN036I21-  
                                                                                                                                         ---------------------------------------------------------->JMFN012M04-  
                                                                                                                                               ----------------------------------------------------->JMFS078B12-