| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002K22 | Sequence | 560 | 000509 (18) | ref|XP_010507605.1| | 1e-39 | PREDICTED: neutral ceramidase-like [Camelina sativa] | 675 | 002814 (7) | gb|ABK95842.1| | 3e-80 | unknown [Populus trichocarpa] |
| JMFN012M04 | Sequence | 618 | 002814 (7) | gb|ABK95842.1| | 3e-85 | unknown [Populus trichocarpa] | |||||
| JMFN036I21 | Sequence | 469 | 002814 (7) | gb|ABK95842.1| | 8e-89 | unknown [Populus trichocarpa] | |||||
| JMFS078B12 | Sequence | 566 | 002814 (7) | gb|ABK95842.1| | 1e-72 | unknown [Populus trichocarpa] | |||||
| JMSF009P08 | Sequence | 237 | 000509 (18) | 798 | 002814 (7) | gb|ABK95842.1| | 9e-129 | unknown [Populus trichocarpa] | |||
| JMSF016K06 | Sequence | 558 | 000509 (18) | ref|XP_010507605.1| | 8e-39 | PREDICTED: neutral ceramidase-like [Camelina sativa] | 759 | 002814 (7) | gb|ABK95842.1| | 2e-65 | unknown [Populus trichocarpa] |
| JMSF041B13 | Sequence | 532 | 000509 (18) | ref|XP_008457412.1| | 8e-15 | PREDICTED: neutral ceramidase-like isoform X1 [Cucumis melo] | 637 | 002814 (7) | gb|ABK95842.1| | 2e-84 | unknown [Populus trichocarpa] |
This contig is upended
. : . : . : . : . : . :
rJMSF009P08+ CCGCATCAGAATTCAACAG
____________________________________________________________
consensus CCGCATCAGAATTCAACAG
. : . : . : . : . : . :
JMFN036I21- AGCTGGGTTTACTAATACATATTCACAATATGTTACTACGTA
rJMSF009P08+ TNATGTTCATGTTGTGATAGCTGGGTTGACTAATACATATTCACAATATGTTACTACGTA
____________________________________________________________
consensus TNATGTTCATGTTGTGATAGCTGGGTTTACTAATACATATTCACAATATGTTACTACGTA
. : . : . : . : . : . :
JMFN036I21- TGAGGAGTATGAGATACAAAGATATGAGGGTGCCTCGACATTGTATGGTCCACATACACT
rJMSF009P08+ TGAGGAGTATGAGATACAAAGATATGAGGGTGCCTCGACATTGTATGGTCCACATACACT
____________________________________________________________
consensus TGAGGAGTATGAGATACAAAGATATGAGGGTGCCTCGACATTGTATGGTCCACATACACT
. : . : . : . : . : . :
rJMSF041B13+ GAAGCTTGCAAAGGCCATGGTAACTGGTCTGTCCCG
JMFN036I21- GAATGCCTACATTCAAGAGTTTAAGAAGCTTGCAAAGGCCATGGTAACTGGTCTGT-CCG
rJMSF009P08+ GAATGCCTACATTCAAGAGTTTAAGAAGCTTGCAAAGGCCATGGTAACTGGTCTGT-CCG
JMFN012M04- CCG
____________________________________________________________
consensus GAATGCCTACATTCAAGAGTTTAAGAAGCTTGCAAAGGCCATGGTAACTGGTCTGT-CCG
. : . : . : . : . : . :
rJMSF041B13+ TGGAAGCAGGCCCCAATCCTCCAGATTTACTAGACAAGCAGCTGAGCTTCTTGACACCAG
JMFN036I21- TGGAAGCAGGCCCCAATCCTCCAGATTTACTAGACAAGCAGCTGAGCTTCTTGACACCAG
rJMSF009P08+ TGGAAGCAGGCCCCAATCCTCCAGATTTACTAGACAAGCAGCTGAGCTTCTTGACACCAG
JMFN012M04- TGGAAGCAGGCCCCAATCCTCCAGATTTACTAGACAAGCAGCTGAGCTTCTTGACACCAG
JMFS078B12- CCAG
rJMFF002K22+ TCCAGATTTACTAGACAAGCAGCTGAGCTTCTTGACACCAG
____________________________________________________________
consensus TGGAAGCAGGCCCCAATCCTCCAGATTTACTAGACAAGCAGCTGAGCTTCTTGACACCAG
. : . : . : . : . : . :
rJMSF041B13+ TTGTAATGGATACAACACCACTTGGCACTAGCTTTGGAGATGTCGTGACAGATGTTCCTA
JMFN036I21- TTGTAATGGATACAACACCACTTGGCACTAGCTTTGGAGATGTCGTGACAGATGTTCCTA
rJMSF009P08+ TTGTAATGGATACAACACCACTTGGCACTAGCTTTGGAGATGTCGTGACAGATGTTCCTA
JMFN012M04- TTGTAATGGATACAACACCACTTGGCACTAGCTTTGGAGATGTCGTGACAGATGTTCCTA
JMFS078B12- TTGTAATGGATACAACACCACTTGGCACTAGCTTTGGAGATGTCGTGACAGATGTTCCTA
rJMFF002K22+ TTGTAATGGATACAACACCACTTGGCACTAGCTTTGGAGATGTCGTGACAGATGTTCCTA
rJMSF016K06+ TTGGCACTAGCTTNGGAGATGTCGTGACAGATGTTCCTA
____________________________________________________________
consensus TTGTAATGGATACAACACCACTTGGCACTAGCTTTGGAGATGTCGTGACAGATGTTCCTA
. : . : . : . : . : . :
rJMSF041B13+ AAAACTCCACTGCGAAGAGGGGCGACCTGGTGACAGTTGTTTTCCAATCAGCATGCCCCC
JMFN036I21- AAAACTCCACTGCGAAGAGGGGCGACCTGGTGACAGTTGTTTTCCAATCAGCATGCCCCC
rJMSF009P08+ AAAACTCCACTGCGAAGAGGGGCGACCTGGTGACAGTTGTTTTCCAATCAGCATGCCCCC
JMFN012M04- AAAACTCCACTGCGAAGAGGGGCGACCTGGTGACAGTTGTTTTCCAATCAGCATGCCCCC
JMFS078B12- AAAACTCCACTGCGAAGAGGGGCGACCTGGTGACAGTTGTTTTCCAATCAGCATGCCCCC
rJMFF002K22+ AAAACTCCACTGCGAAGAGGGGCGACCTGGTGACAGTTGTTTTCCAATCAGCATGCCCCC
rJMSF016K06+ AAAACTCCACTGCGAAGAGGGGCGACCTGGTGACAGTTGTTTTCCAATCAGCATGCCCCC
____________________________________________________________
consensus AAAACTCCACTGCGAAGAGGGGCGACCTGGTGACAGTTGTTTTCCAATCAGCATGCCCCC
. : . : . : . : . : . :
rJMSF041B13+ GAAATGACCTCATGACCGAGGGTACATTTGCCCTTGTGGAGATCCTCCAAGGAAAGGACA
JMFN036I21- GAAATGACCTCATGACCGAGGGTACATTTGCCCTTGTGGAGATCCTCCAAGGAAAGGACA
rJMSF009P08+ GAAATGACCTCATGACCGAGGGTACATTTGCCCTTGTGGAGATCCTCCAAGGAAAGGACA
JMFN012M04- GAAATGACCTCATGACCGAGGGTACATTTGCCCTTGTGGAGATCCTCCAAGGAAAGGACA
JMFS078B12- GAAATGACCTCATGACCGAGGGTACATTTGCCCTTGTGGAGATCCTCCAAGGAAAGGACA
rJMFF002K22+ GAAATGACCTCATGACCGAGGGTACATTTGCCCTTGTGGAGATCCTCCAAGGAAAGGACA
rJMSF016K06+ GAAATGACCTCATGACCGAGGGTACATTTGCCCTTGTGGAGATCCTCCAAGGAAAGGACA
____________________________________________________________
consensus GAAATGACCTCATGACCGAGGGTACATTTGCCCTTGTGGAGATCCTCCAAGGAAAGGACA
. : . : . : . : . : . :
rJMSF041B13+ CCTGGCTTCCTGCTTACGACGATGATGACTTCTGTCTTAGGTTTATTTGGTCAAGACCCG
JMFN036I21- CCTGGCTTCCTGCTTACGACGATGATGACTTCTGTCTTAGGTTTATTTGGTCAAGACCCG
rJMSF009P08+ CCTGGCTTCCTGCTTACGACGATGATGACTTCTGTCTTAGGTTTATTTGGTCAAGACCCG
JMFN012M04- CCTGGCTTCCTGCTTACGACGATGATGACTTCTGTCTTAGGTTTATTTGGTCAAGACCCG
JMFS078B12- CCTGGCTTCCTGCTTACGACGATGATGACTTCTGTCTTAGGTTTATTTGGTCAAGACCCG
rJMFF002K22+ CCTGGCTTCCTGCTTACGACGATGATGACTTCTGTCTTAGGTTTATTTGGTCAAGACCCG
rJMSF016K06+ CCTGGCTTCCTGCTTACGACGATGATGACTTCTGTCTTAGGTTTATTTGGTCAAGACCCG
____________________________________________________________
consensus CCTGGCTTCCTGCTTACGACGATGATGACTTCTGTCTTAGGTTTATTTGGTCAAGACCCG
. : . : . : . : . : . :
rJMSF041B13+ CTAAACTAAGTCCTAGAAGTGAAGCAACCATAGAATGGAGAATACCCTCCTCAGCCACTC
JMFN036I21- CTAAACTA
rJMSF009P08+ CTAAACTAAGTCCTAGAAGTGAAGCAACCATAGAATGGAGAATACCCTCCTCAGCCACTC
JMFN012M04- CTAAACTAAGTCCTAGAAGTGAAGCAACCATAGAATGGAGAATACCCTCCTCAGCCACTC
JMFS078B12- CTAAACTAAGTCCTAGAAGTGAAGCAACCATAGAATGGAGAATACCCTCCTCAGCCACTC
rJMFF002K22+ CTAAACTAAGTCCTAGAAGTGAAGCAACCATAGAATGGAGAATACCCTCCTCAGCCACTC
rJMSF016K06+ CTAAACTAAGTCCTAGAAGTGAAGCAACCATAGAATGGAGAATACCCTCCTCAGCCACTC
____________________________________________________________
consensus CTAAACTAAGTCCTAGAAGTGAAGCAACCATAGAATGGAGAATACCCTCCTCAGCCACTC
. : . : . : . : . : . :
rJMSF041B13+ CTGGTGTATACAGAATTAGGCATTTTGGTGCTGCAAAGTCTCTTCTAGGCTCCATTAAAC
rJMSF009P08+ CTGGTGTATACAGAATTAGGCATTTTGGTGCTGCAAAGTCTCTTCTAGGCTCCATTAAAC
JMFN012M04- CTGGTGTATACAGAATTAGGCATTTTGGTGCTGCAAAGTCTCTTCTAGGCTCCATTAAAC
JMFS078B12- CTGGTGTATACAGAATTAGGCATTTTGGTGCTGCAAAGTCTCTTCTAGGCTCCATTAAAC
rJMFF002K22+ CTGGTGTATACAGAATTAGGCATTTTGGTGCTGCAAAGTCTCTTCTAGGCTCCATTAAAC
rJMSF016K06+ CTGGTGTATACAGAATTAGGCATTTTGGTGCTGCAAAGTCTCTTCTAGGCTCCATTAAAC
____________________________________________________________
consensus CTGGTGTATACAGAATTAGGCATTTTGGTGCTGCAAAGTCTCTTCTAGGCTCCATTAAAC
. : . : . : . : . : . :
rJMSF041B13+ ACTTTACAGGTACATCAAGTGCCTTTGTGGTCGTTTAGTGAAGACTCTCTACTGTTTTCT
rJMSF009P08+ ACTTTACAGGTACATCAAGTGCCTTTGTGGTCGTTTAGTGAAGACTCTCTACTGTTTTCT
JMFN012M04- ACTTTACAGGTACATCAAGTGCCTTTGTGGTCGTTTAGTGAAGACTCTCTACTGTTTTCT
JMFS078B12- ACTTTACAGGTACATCAAGTGCCTTTGTGGTCGTTTAGTGAAGACTCTCTACTGTTTTCT
rJMFF002K22+ ACTTTACAGGTACATCAAGTGCCTTTGTGGTCGTTTAGTGAAGACTCTCTACTGTTTTCT
rJMSF016K06+ ACTTTACAGGTACATCAAGTGCCTTTGTGGTCGTTTAGTGAAGACTCTCTACTGTTTTCT
____________________________________________________________
consensus ACTTTACAGGTACATCAAGTGCCTTTGTGGTCGTTTAGTGAAGACTCTCTACTGTTTTCT
. : . : . : . : . : . :
rJMSF041B13+ CGCTTGTGTCCAATTACACCAGTATCATGCGAGTGTACTGAAGCAGTTAAAGCAATAGCG
rJMSF009P08+ CGCTTGTGTCCAATTACACCAGTATCATGCGAGTGTACTGAAGCAGTTAAAGCAATAGCG
JMFN012M04- CGCTTGTGTCCAATTACACCAGTATCATGCGAGTGTACTGAAGCAGTTAAAGCAATAGCG
JMFS078B12- CGCTTGTGTCCAATTACACCAGTATCATGCGAGTGTACTGAAGCAGTTAAAGCAATAGCG
rJMFF002K22+ CGCTTGTGTCCAATTACACCAGTATCATGCGAGTGTACTGAAGCAGTTAAAGCAATAGCG
rJMSF016K06+ CGCTTGTGTCCAATTACACCAGTATCATGCGAGTGTACTGAAGCAGTTAAAGCAATAGCG
____________________________________________________________
consensus CGCTTGTGTCCAATTACACCAGTATCATGCGAGTGTACTGAAGCAGTTAAAGCAATAGCG
. : . : . : . : . : . :
rJMSF041B13+ TCCACACAAATCGCAGTCTCTGTTTTATAGATATAATTAAC
rJMSF009P08+ TCCACACAAATCGCAGTCTCTGTTTTATAGATATAATTAACAGTTCTGCTATTGCAAAAT
JMFN012M04- TCCACACAAATCGCAGTCTCTGTTTTATAGATATAATTAACAGTTCTGCTATTGCAAAAT
JMFS078B12- TCCACACAAATCGCAGTCTCTGTTTTATAGATATAATTAACAGTTCTGCTATTGCAAAAT
rJMFF002K22+ TCCACACAAATCGCAGTCTCTGTTTTATAGATATAATTAACAGTTCTGCTATTGCAAAAT
rJMSF016K06+ TCCACACAAATCGCAGTCTCTGTTTTATAGATATAATTAACAGTTCTGCTATTGCAAAAT
____________________________________________________________
consensus TCCACACAAATCGCAGTCTCTGTTTTATAGATATAATTAACAGTTCTGCTATTGCAAAAT
. : . : . : . : . : . :
JMFN012M04- ATATTTATC
JMFS078B12- ATATTTATCAGAACAGTTTATT
rJMFF002K22+ ATATTTATCAGAACAGTTTATTAAACCCATTTGTTCTACACTTTGTACTAGACTATATCT
rJMSF016K06+ ATATTTATCAGAACAGTTTATTAAACCCATTTGTTCTACACTTTGTACTAGACTATATCT
____________________________________________________________
consensus ATATTTATCAGAACAGTTTATTAAACCCATTTGTTCTACACTTTGTACTAGACTATATCT
. : . : . : . : . : . :
rJMFF002K22+ ACATTCTTGTGTTAAGGATATGAATGAGGGAGAA
rJMSF016K06+ ACATTCTTGTGTTAAGGATATGAATGAGGGAGAATGGCAAGAGAGTTCTTATTAAAAAGA
____________________________________________________________
consensus ACATTCTTGTGTTAAGGATATGAATGAGGGAGAATGGCAAGAGAGTTCTTATTAAAAAGA
. : . : . : . : . : . :
rJMSF016K06+ GGAGAGAGATAACCTACAACAATATAATCTTGCATGTTGCATCGAAAGAGGATGAATGCC
____________________________________________________________
consensus GGAGAGAGATAACCTACAACAATATAATCTTGCATGTTGCATCGAAAGAGGATGAATGCC
. : . : . : . : . : . :
rJMSF016K06+ TTTTGGTGGAGAGTCAGAGCAAACATTGTACCATAGTTTGTAAGGGAACCACGGCTCATT
____________________________________________________________
consensus TTTTGGTGGAGAGTCAGAGCAAACATTGTACCATAGTTTGTAAGGGAACCACGGCTCATT