List of clones in pair P000892.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022B18Sequence506009274 (5)ref|XP_006350582.1|8e-31PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [737011206 (4)emb|CDP05091.1|1e-78unnamed protein product [Coffea canephora]
JMFF048D13Sequence381009274 (5)ref|XP_006350582.1|2e-18PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [369011206 (4)gb|KCW90557.1|2e-36hypothetical protein EUGRSUZ_A026652, partial [Eucalyptus grandis] gb|KCW90558.1
JMFS018A11Sequence603009274 (5)ref|XP_006350582.1|1e-34PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [
JMSF017I17Sequence485009274 (5)ref|XP_006350582.1|7e-30PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [750011206 (4)ref|XP_004308009.1|2e-100PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Fraga
JMSF052M12Sequence553009274 (5)ref|XP_006350582.1|2e-30PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [908011206 (4)emb|CDP05091.1|1e-146unnamed protein product [Coffea canephora]

Contig 9274 BLAST Hits against nr-aa DB Show

Contig 11206 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig009274============================================ 625         ============================================Contig011206============================================ 944
   7  ----------------------------------------------------------->JMFF048D13                                                                                                       <--------------------------------------rJMFF048D13  
  43 ----------------------------------------------------------------------------->JMSF017I17                                               <-------------------------------------------------------------------------rJMSF017I17  
  48  --------------------------------------------------------------------------------------->JMSF052M12              <-----------------------------------------------------------------------------------------------rJMSF052M12  
 170  -------------------------------------------------------------------------------->JMFF022B18                                           <------------------------------------------------------------rJMFF022B18  
         ----------------------------------------------------------------------------------------------->JMFS018A11-